==> Synchronizing chroot copy [/home/alhp/workspace/chroot/root] -> [build_0c6b60bd-6873-4b69-b401-8c82a8c7d366]...done
==> Making package: netcdf-fortran-openmpi 4.6.1-2.1 (Mon Feb 10 21:38:14 2025)
==> Retrieving sources...
-> Cloning netcdf-fortran git repo...
Cloning into bare repository '/home/alhp/workspace/build/x86-64-v3/netcdf-fortran-openmpi-4.6.1-2/netcdf-fortran'...
==> Validating source files with sha256sums...
netcdf-fortran ... Passed
==> Making package: netcdf-fortran-openmpi 4.6.1-2.1 (Mon Feb 10 20:38:21 2025)
==> Checking runtime dependencies...
==> Installing missing dependencies...
resolving dependencies...
looking for conflicting packages...
warning: dependency cycle detected:
warning: pnetcdf-openmpi will be installed before its netcdf-openmpi dependency
Package (14) New Version Net Change
extra/hdf5-openmpi 1.14.5-1 10.47 MiB
extra/hwloc 2.11.2-1 1.64 MiB
extra/libaec 1.1.3-1 0.10 MiB
extra/libfabric 2.0.0-1 4.69 MiB
core/libnl 3.11.0-1 2.08 MiB
extra/libpciaccess 0.18.1-2 0.06 MiB
extra/libzip 1.11.2-1 0.46 MiB
extra/numactl 2.0.19-1 0.24 MiB
extra/openmpi 5.0.6-2 9.92 MiB
extra/openpmix 5.0.6-1 3.64 MiB
extra/openucx 1.18.0-1 6.33 MiB
extra/pnetcdf-openmpi 1.12.3-5 15.75 MiB
extra/prrte 3.0.8-1 1.91 MiB
extra/netcdf-openmpi 4.9.3-2 2.55 MiB
Total Installed Size: 59.85 MiB
:: Proceed with installation? [Y/n]
checking keyring...
checking package integrity...
loading package files...
checking for file conflicts...
:: Processing package changes...
installing libaec...
installing libpciaccess...
installing hwloc...
Optional dependencies for hwloc
cairo: PDF, Postscript, and PNG export support
libxml2: full XML import/export support [installed]
installing numactl...
installing libfabric...
installing libnl...
installing openpmix...
Optional dependencies for openpmix
openpmix-docs: for documentation
installing openucx...
Optional dependencies for openucx
rdma-core: for InfiniBand and RDMA support
cuda: for CUDA support
rocm-language-runtime: for ROCm support
installing prrte...
Optional dependencies for prrte
openssh: for execution on remote hosts via plm_ssh_agent
prrte-docs: for documentation
installing openmpi...
Optional dependencies for openmpi
cuda: cuda support
hip-runtime-amd: ROCm support
gcc-fortran: fortran support
openssh: for execution on remote hosts via plm_ssh_agent
openucc: for UCC accelerated collectives
installing hdf5-openmpi...
installing pnetcdf-openmpi...
installing libzip...
installing netcdf-openmpi...
Optional dependencies for netcdf-openmpi
netcdf-fortran: fortran bindings
netcdf-cxx: c++ bindings
:: Running post-transaction hooks...
(1/1) Arming ConditionNeedsUpdate...
==> Checking buildtime dependencies...
==> Installing missing dependencies...
resolving dependencies...
looking for conflicting packages...
Package (22) New Version Net Change
extra/clang 19.1.7-1 197.75 MiB
extra/compiler-rt 19.1.7-1 43.92 MiB
extra/cppdap 1.58.0-2 1.55 MiB
core/debuginfod 0.192-4 0.38 MiB
extra/fmt 11.1.3-1 0.69 MiB
extra/hicolor-icon-theme 0.18-1 0.05 MiB
extra/jsoncpp 1.9.6-3 0.77 MiB
core/libedit 20240808_3.1-1 0.26 MiB
core/libmicrohttpd 1.0.1-1 0.59 MiB
extra/libuv 1.50.0-1 0.61 MiB
extra/llvm-libs 19.1.7-1 134.51 MiB
extra/perl-error 0.17029-7 0.04 MiB
extra/perl-mailtools 2.22-1 0.10 MiB
extra/perl-timedate 2.33-7 0.08 MiB
extra/rhash 1.4.4-1 0.32 MiB
extra/spdlog 1.15.1-1 0.66 MiB
extra/cmake 3.31.5-1 77.89 MiB
extra/doxygen 1.13.2-1 18.60 MiB
core/gcc-fortran 14.2.1+r753+g1cd744a6828f-1 44.23 MiB
extra/git 2.48.1-1 28.48 MiB
core/inetutils 2.5-1 1.07 MiB
extra/valgrind 3.24.0-3 72.19 MiB
Total Installed Size: 624.76 MiB
:: Proceed with installation? [Y/n]
checking keyring...
checking package integrity...
loading package files...
checking for file conflicts...
:: Processing package changes...
installing cppdap...
installing hicolor-icon-theme...
installing jsoncpp...
Optional dependencies for jsoncpp
jsoncpp-doc: documentation
installing libuv...
installing rhash...
installing cmake...
Optional dependencies for cmake
make: for unix Makefile generator [installed]
ninja: for ninja generator
qt6-base: cmake-gui
installing gcc-fortran...
installing perl-error...
installing perl-timedate...
installing perl-mailtools...
installing git...
Optional dependencies for git
tk: gitk and git gui
openssh: ssh transport and crypto
perl-libwww: git svn
perl-term-readkey: git svn and interactive.singlekey setting
perl-io-socket-ssl: git send-email TLS support
perl-authen-sasl: git send-email TLS support
perl-mediawiki-api: git mediawiki support
perl-datetime-format-iso8601: git mediawiki support
perl-lwp-protocol-https: git mediawiki https support
perl-cgi: gitweb (web interface) support
python: git svn & git p4
subversion: git svn
org.freedesktop.secrets: keyring credential helper
libsecret: libsecret credential helper [installed]
installing libedit...
installing llvm-libs...
installing compiler-rt...
installing clang...
Optional dependencies for clang
openmp: OpenMP support in clang with -fopenmp
python: for scan-view and git-clang-format
llvm: referenced by some clang headers
installing fmt...
installing spdlog...
installing doxygen...
Optional dependencies for doxygen
graphviz: for caller/callee graph generation
qt6-base: for doxywizard
texlive-fontsrecommended: for generating LaTeX, Postscript and PDF output
texlive-fontutils: for generating LaTeX, Postscript and PDF output
texlive-latexextra: for generating LaTeX, Postscript and PDF output
texlive-plaingeneric: for generating LaTeX, Postscript and PDF output
installing libmicrohttpd...
installing debuginfod...
Optional dependencies for debuginfod
elfutils=0.192: for translations
installing valgrind...
Optional dependencies for valgrind
lib32-glibc: 32-bit ABI support [installed]
python: cg_* scripts
installing inetutils...
:: Running post-transaction hooks...
(1/5) Creating system user accounts...
Creating group 'git' with GID 972.
Creating user 'git' (git daemon user) with UID 972 and GID 972.
Creating group '_talkd' with GID 971.
Creating user '_talkd' (User for legacy talkd server) with UID 971 and GID 971.
(2/5) Reloading system manager configuration...
Skipped: Current root is not booted.
(3/5) Arming ConditionNeedsUpdate...
(4/5) Warn about old perl modules
(5/5) Updating the info directory file...
==> Retrieving sources...
==> WARNING: Skipping all source file integrity checks.
==> Extracting sources...
-> Creating working copy of netcdf-fortran git repo...
Cloning into 'netcdf-fortran'...
done.
Switched to a new branch 'makepkg'
==> Starting prepare()...
==> Starting build()...
-- The C compiler identification is GNU 14.2.1
-- The Fortran compiler identification is GNU 14.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/mpicc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/bin/mpifort - skipped
CMake Warning (dev) at CMakeLists.txt:41 (exec_program):
Policy CMP0153 is not set: The exec_program command should not be called.
Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
Use execute_process() instead.
Call Stack (most recent call first):
CMakeLists.txt:43 (getuname)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at CMakeLists.txt:41 (exec_program):
Policy CMP0153 is not set: The exec_program command should not be called.
Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
Use execute_process() instead.
Call Stack (most recent call first):
CMakeLists.txt:44 (getuname)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at CMakeLists.txt:41 (exec_program):
Policy CMP0153 is not set: The exec_program command should not be called.
Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
Use execute_process() instead.
Call Stack (most recent call first):
CMakeLists.txt:45 (getuname)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Found Doxygen: /usr/bin/doxygen (found version "1.13.2") found components: doxygen missing components: dot
-- Found m4: /usr/bin/m4
-- Found netCDF CMake package: netCDF::netcdf
-- Whether NetCDF-C built with HDF5 enabled: yes
-- Looking for alloca.h
-- Looking for alloca.h - found
-- Looking for malloc.h
-- Looking for malloc.h - found
-- Looking for ctype.h
-- Looking for ctype.h - found
-- Looking for dirent.h
-- Looking for dirent.h - found
-- Looking for dlfcn.h
-- Looking for dlfcn.h - found
-- Looking for errno.h
-- Looking for errno.h - found
-- Looking for fcntl.h
-- Looking for fcntl.h - found
-- Looking for getopt.h
-- Looking for getopt.h - found
-- Looking for stdbool.h
-- Looking for stdbool.h - found
-- Looking for locale.h
-- Looking for locale.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stdio.h
-- Looking for stdio.h - found
-- Looking for stdlib.h
-- Looking for stdlib.h - found
-- Looking for stdarg.h
-- Looking for stdarg.h - found
-- Looking for strings.h
-- Looking for strings.h - found
-- Looking for signal.h
-- Looking for signal.h - found
-- Looking for sys/dir.h
-- Looking for sys/dir.h - found
-- Looking for sys/ndir.h
-- Looking for sys/ndir.h - not found
-- Looking for sys/param.h
-- Looking for sys/param.h - found
-- Looking for sys/stat.h
-- Looking for sys/stat.h - found
-- Looking for sys/time.h
-- Looking for sys/time.h - found
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for sys/wait.h
-- Looking for sys/wait.h - found
-- Looking for sys/resource.h
-- Looking for sys/resource.h - found
-- Looking for inttypes.h
-- Looking for inttypes.h - found
-- Looking for pstdint.h
-- Looking for pstdint.h - not found
-- Looking for endian.h
-- Looking for endian.h - found
-- Looking for BaseTsd.h
-- Looking for BaseTsd.h - not found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Looking for memory.h
-- Looking for memory.h - found
-- Looking for netcdf.h
-- Looking for netcdf.h - found
-- Check size of void*
-- Check size of void* - done
-- Check size of char
-- Check size of char - done
-- Check size of double
-- Check size of double - done
-- Check size of float
-- Check size of float - done
-- Check size of int
-- Check size of int - done
-- Check size of long
-- Check size of long - done
-- Check size of long long
-- Check size of long long - done
-- Check size of off_t
-- Check size of off_t - done
-- Check size of off64_t
-- Check size of off64_t - failed
-- Check size of short
-- Check size of short - done
-- Check size of size_t
-- Check size of size_t - done
-- Check size of ssize_t
-- Check size of ssize_t - done
-- Check size of __int64
-- Check size of __int64 - failed
-- Check size of uchar
-- Check size of uchar - failed
-- Check size of int64_t
-- Check size of int64_t - done
-- Check size of uint64_t
-- Check size of uint64_t - done
-- Performing Test COMPILER_HAS_ALLOW_ARGUMENT_MISMATCH
-- Performing Test COMPILER_HAS_ALLOW_ARGUMENT_MISMATCH - Success
-- Performing Test COMPILER_HAS_MISMATCH_ALL
-- Performing Test COMPILER_HAS_MISMATCH_ALL - Failed
-- Looking for alloca
-- Looking for alloca - not found
-- Looking for nccreate in netCDF::netcdf
-- Looking for nccreate in netCDF::netcdf - found
-- Looking for nc_set_log_level in netCDF::netcdf
-- Looking for nc_set_log_level in netCDF::netcdf - found
-- Looking for oc_open in netCDF::netcdf
-- Looking for oc_open in netCDF::netcdf - found
-- Performing Test HAVE_SZIP_WRITE
-- Performing Test HAVE_SZIP_WRITE - Success
-- Performing Test HAVE_QUANTIZE
-- Performing Test HAVE_QUANTIZE - Success
-- Looking for nc_def_var_szip in netCDF::netcdf
-- Looking for nc_def_var_szip in netCDF::netcdf - found
-- Performing Test NC_HAVE_ZSTD
-- Performing Test NC_HAVE_ZSTD - Success
CMake Warning at CMakeLists.txt:692 (MESSAGE):
libnetcdf was built with zstd support, but HDF5_PLUGIN_PATH is not set.
Please set the HDF5_PLUGIN_PATH environmental variable if zstandard tests
fail, or pass -DDISABLE_ZSTANDARD_PLUGIN=TRUE when running cmake.
-- Found MPI_C: /usr/bin/mpicc (found version "3.1")
-- Found MPI_Fortran: /usr/bin/mpifort (found version "3.1")
-- Found MPI: TRUE (found version "3.1")
-- Check size of signed char
-- Check size of signed char - done
Matching Fortran types to C types
Matching Fortran types to C types - done
-- Whether NetCDF-C built with paralle I/O enabled: yes
Create pre-compiled tests.
nf_test C_SOURCES: f03lib.c
Adding C code for Test nf_test to Library
tst_int64 C_SOURCES:
tst_f77_v2 C_SOURCES:
ftest C_SOURCES: f03lib.c
Adding C code for Test ftest to Library
-- CMake Summary:
-- Build Type: Release
-- Building Shared Libraries: ON
-- Building netCDF-4: ON
-- Building DAP Support: ON
-- Logging Support: ON
-- Enabling CDF5: TRUE
-- Relaxed check NC_EINVALCOORDS: TRUE
-- Building Parallel IO: ON
-- Using NetCDF4 Parallel IO: TRUE
-- Using PnetCDF Parallel IO: TRUE
-- Testing Parallel IO: ON
-- Linking against: netCDF::netcdf;
# NetCDF Fortran Configuration Summary
==============================
# General
-------
Library Version: 4.6.1
Configured On:
Host System: x86_64-Linux-6.12.13-1.1-lts
Build Directory: /startdir/src/build
Install Prefix: /usr
# Compiling Options
-----------------
Fortran Compiler: /usr/bin/mpifort
FFLAGS: -O3 -pipe -march=x86-64-v3 -ffile-prefix-map=/startdir/src=/usr/src/debug/netcdf-fortran-openmpi -fallow-argument-mismatch
LDFLAGS: -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-z,pack-relative-relocs -flto=auto -falign-functions=32
C Compiler: /usr/bin/mpicc
CPPFLAGS:
CFLAGS: -march=x86-64-v3 -O3 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=3 -Wformat -Werror=format-security -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -mpclmul -g -ffile-prefix-map=/startdir/src=/usr/src/debug/netcdf-fortran-openmpi -flto=auto -falign-functions=32 -g -Wall -Wno-unused-variable -Wno-unused-parameter -O2
Shared Library: yes
Static Library: no
Extra libraries: -lnetcdf -lnetcdf
# Features
--------
F03: yes
Dap Support: yes
Logging Support: yes
NetCDF-2 API: yes
NetCDF-4 API: yes
CDF5 Support: yes
Parallel IO: yes
NetCDF4 Parallel IO: yes
PnetCDF Parallel IO: yes
SZIP Write Support: yes
Zstandard Support: no
Quantize: yes
-- ATTENTION: NO HDF5_PLUGIN_PATH SET
CMake Warning at CMakeLists.txt:1158 (MESSAGE):
libnetcdf was built with zstd support, but HDF5_PLUGIN_PATH is not set.
Please set the HDF5_PLUGIN_PATH environmental variable if zstandard tests
fail.
CMake Warning at CMakeLists.txt:1159 (MESSAGE):
You can use `nc-config --plugindir` to determine the appropriate value for
HDF5_PLUGIN_PATH
-- Configuring done (12.2s)
-- Generating done (0.1s)
-- Build files have been written to: /startdir/src/build
make: Entering directory '/startdir/src/build'
[ 0%] Building C object fortran/CMakeFiles/netcdff_c.dir/nf_lib.c.o
[ 1%] Building C object fortran/CMakeFiles/netcdff_c.dir/nf_v2compat.c.o
[ 1%] Built target netcdff_c
[ 2%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_nc_data.F90.o
[ 3%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_nc_interfaces.F90.o
[ 4%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf4_nc_interfaces.F90.o
[ 4%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_nf_data.F90.o
[ 5%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf4_nf_interfaces.F90.o
[ 6%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_nf_interfaces.F90.o
[ 6%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf4_f03.F90.o
[ 6%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_f03.F90.o
[ 7%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_fortv2_c_interfaces.F90.o
[ 7%] Building Fortran object fortran/CMakeFiles/netcdff.dir/typeSizes.F90.o
[ 8%] Building Fortran object fortran/CMakeFiles/netcdff.dir/netcdf4.F90.o
/startdir/src/netcdf-fortran/fortran/netcdf4_func.F90:797:75:
797 | nf90_inq_var_fill_FourByteReal = nf_inq_var_fill(ncid, varid, no_fill, fill)
| 1
......
807 | nf90_inq_var_fill_EightByteReal = nf_inq_var_fill(ncid, varid, no_fill, fill)
| 2
Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/REAL(8)).
/startdir/src/netcdf-fortran/fortran/netcdf4_func.F90:737:75:
737 | nf90_def_var_fill_FourByteReal = nf_def_var_fill(ncid, varid, no_fill, fill)
| 1
......
747 | nf90_def_var_fill_EightByteReal = nf_def_var_fill(ncid, varid, no_fill, fill)
| 2
Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/REAL(8)).
[ 9%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_attio.F90.o
[ 10%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_control.F90.o
[ 10%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_dim.F90.o
[ 11%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_misc.F90.o
[ 11%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_genatt.F90.o
[ 12%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_geninq.F90.o
[ 13%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_genvar.F90.o
[ 13%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_vario.F90.o
[ 14%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_var1io.F90.o
[ 14%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_varaio.F90.o
[ 15%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_varmio.F90.o
[ 16%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_varsio.F90.o
[ 16%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_nc.F90.o
[ 17%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_nc4.F90.o
[ 17%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_logging.F90.o
[ 17%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_fortv2.F90.o
[ 18%] Linking Fortran shared library libnetcdff.so
[ 18%] Built target netcdff
[ 19%] Building C object nf_test/CMakeFiles/nf_test_c.dir/f03lib.c.o
[ 19%] Built target nf_test_c
[ 20%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/f03lib_f_interfaces.F90.o
[ 20%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/test_get.F.o
[ 21%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/test_put.F.o
[ 21%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/nf_error.F.o
[ 22%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/nf_test.F.o
[ 23%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/test_read.F.o
[ 23%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/test_write.F.o
[ 24%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/util.F.o
[ 24%] Linking Fortran executable nf_test
[ 24%] Built target nf_test
[ 25%] Building Fortran object nf_test/CMakeFiles/tst_int64.dir/tst_int64.F.o
[ 26%] Linking Fortran executable tst_int64
[ 26%] Built target tst_int64
[ 26%] Building Fortran object nf_test/CMakeFiles/tst_f77_v2.dir/tst_f77_v2.F.o
[ 27%] Linking Fortran executable tst_f77_v2
[ 27%] Built target tst_f77_v2
[ 28%] Building C object nf_test/CMakeFiles/ftest_c.dir/f03lib.c.o
[ 28%] Built target ftest_c
[ 29%] Building Fortran object nf_test/CMakeFiles/ftest.dir/ftest.F.o
/startdir/src/netcdf-fortran/nf_test/ftest.F:1436:33:
1433 | call ncvgt1(ncid, bid, ix, b, iret)
| 2
......
1436 | call ncvgt1(ncid, sid, ix, s, iret)
| 1
Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)).
/startdir/src/netcdf-fortran/nf_test/ftest.F:224:50:
213 | call ncagt (outcdf, NCBYTE, attnam, bytval, iret)
| 2
......
224 | call ncagt (outcdf, NCGLOBAL, attnam, shval, iret)
| 1
Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)).
/startdir/src/netcdf-fortran/nf_test/ftest.F:1039:47:
1026 | call ncvgt (ncid, m, start, count, barray, iret)
| 2
......
1039 | call ncvgt (ncid, m, start, count, sarray, iret)
| 1
Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)).
/startdir/src/netcdf-fortran/nf_test/ftest.F:1260:43:
1254 | call ncvpt (ncid, bid, start, count, barray, iret)
| 2
......
1260 | call ncvpt (ncid, sid, start, count, sarray, iret)
| 1
Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)).
/startdir/src/netcdf-fortran/nf_test/ftest.F:1366:37:
1360 | call ncvpt1 (ncid, bid, bindx, bvalue, iret)
| 2
......
1366 | call ncvpt1 (ncid, sid, sindx, svalue, iret)
| 1
Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)).
/startdir/src/netcdf-fortran/nf_test/ftest.F:569:72:
559 | call ncapt (ncid, bid, 'validrange', NCBYTE, 2,
| 2
......
569 | call ncapt (ncid, sid, 'validrange', NCSHORT, 2,
| 1
Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)).
[ 29%] Linking Fortran executable ftest
[ 29%] Built target ftest
[ 29%] Building Fortran object nf03_test/CMakeFiles/tst_f90.dir/tst_f90.F90.o
[ 30%] Linking Fortran executable tst_f90
[ 30%] Built target tst_f90
[ 31%] Building Fortran object nf03_test/CMakeFiles/tst_fill_int64.dir/tst_fill_int64.F90.o
[ 31%] Linking Fortran executable tst_fill_int64
[ 31%] Built target tst_fill_int64
[ 32%] Building Fortran object nf_test4/CMakeFiles/ftst_parallel.dir/ftst_parallel.F.o
[ 32%] Linking Fortran executable ftst_parallel
[ 32%] Built target ftst_parallel
[ 33%] Building Fortran object nf_test4/CMakeFiles/ftst_parallel_nasa.dir/ftst_parallel_nasa.F.o
[ 34%] Linking Fortran executable ftst_parallel_nasa
[ 34%] Built target ftst_parallel_nasa
[ 34%] Building Fortran object nf_test4/CMakeFiles/ftst_filter.dir/ftst_filter.F.o
[ 35%] Linking Fortran executable ftst_filter
[ 35%] Built target ftst_filter
[ 36%] Building Fortran object nf_test4/CMakeFiles/ftst_groups.dir/ftst_groups.F.o
[ 36%] Linking Fortran executable ftst_groups
[ 36%] Built target ftst_groups
[ 37%] Building Fortran object nf_test4/CMakeFiles/ftst_vars.dir/ftst_vars.F.o
[ 38%] Linking Fortran executable ftst_vars
[ 38%] Built target ftst_vars
[ 38%] Building Fortran object nf_test4/CMakeFiles/ftst_vars2.dir/ftst_vars2.F.o
[ 39%] Linking Fortran executable ftst_vars2
[ 39%] Built target ftst_vars2
[ 39%] Building Fortran object nf_test4/CMakeFiles/ftst_vars3.dir/ftst_vars3.F.o
[ 40%] Linking Fortran executable ftst_vars3
[ 40%] Built target ftst_vars3
[ 41%] Building Fortran object nf_test4/CMakeFiles/ftst_vars4.dir/ftst_vars4.F.o
[ 41%] Linking Fortran executable ftst_vars4
[ 41%] Built target ftst_vars4
[ 42%] Building Fortran object nf_test4/CMakeFiles/ftst_vars5.dir/ftst_vars5.F.o
[ 42%] Linking Fortran executable ftst_vars5
[ 42%] Built target ftst_vars5
[ 43%] Building Fortran object nf_test4/CMakeFiles/ftst_vars6.dir/ftst_vars6.F.o
[ 44%] Linking Fortran executable ftst_vars6
[ 44%] Built target ftst_vars6
[ 45%] Building Fortran object nf_test4/CMakeFiles/ftst_types.dir/ftst_types.F.o
[ 45%] Linking Fortran executable ftst_types
[ 45%] Built target ftst_types
[ 46%] Building Fortran object nf_test4/CMakeFiles/ftst_types2.dir/ftst_types2.F.o
[ 46%] Linking Fortran executable ftst_types2
[ 46%] Built target ftst_types2
[ 47%] Building Fortran object nf_test4/CMakeFiles/ftst_types3.dir/ftst_types3.F.o
[ 48%] Linking Fortran executable ftst_types3
[ 48%] Built target ftst_types3
[ 48%] Building Fortran object nf_test4/CMakeFiles/ftst_path.dir/ftst_path.F.o
[ 49%] Linking Fortran executable ftst_path
[ 49%] Built target ftst_path
[ 49%] Building Fortran object nf_test4/CMakeFiles/ftst_rengrps.dir/ftst_rengrps.F.o
[ 50%] Linking Fortran executable ftst_rengrps
[ 50%] Built target ftst_rengrps
[ 51%] Building Fortran object nf_test4/CMakeFiles/f03tst_open_mem.dir/f03tst_open_mem.F.o
[ 51%] Linking Fortran executable f03tst_open_mem
[ 51%] Built target f03tst_open_mem
[ 51%] Building Fortran object nf_test4/CMakeFiles/ftst_var_compact.dir/ftst_var_compact.F.o
[ 52%] Linking Fortran executable ftst_var_compact
[ 52%] Built target ftst_var_compact
[ 52%] Building Fortran object nf_test4/CMakeFiles/ftst_zstandard.dir/ftst_zstandard.F.o
[ 53%] Linking Fortran executable ftst_zstandard
[ 53%] Built target ftst_zstandard
[ 53%] Building Fortran object nf_test4/CMakeFiles/ftst_v2.dir/ftst_v2.F.o
[ 54%] Linking Fortran executable ftst_v2
[ 54%] Built target ftst_v2
[ 55%] Building Fortran object nf_test4/CMakeFiles/ftst_var_szip.dir/ftst_var_szip.F.o
[ 55%] Linking Fortran executable ftst_var_szip
[ 55%] Built target ftst_var_szip
[ 55%] Building Fortran object nf03_test4/CMakeFiles/f90tst_parallel.dir/f90tst_parallel.F90.o
[ 56%] Linking Fortran executable f90tst_parallel
[ 56%] Built target f90tst_parallel
[ 56%] Building Fortran object nf03_test4/CMakeFiles/f90tst_parallel2.dir/f90tst_parallel2.F90.o
[ 57%] Linking Fortran executable f90tst_parallel2
[ 57%] Built target f90tst_parallel2
[ 58%] Building Fortran object nf03_test4/CMakeFiles/f90tst_parallel3.dir/f90tst_parallel3.F90.o
[ 58%] Linking Fortran executable f90tst_parallel3
[ 58%] Built target f90tst_parallel3
[ 59%] Building Fortran object nf03_test4/CMakeFiles/f90tst_nc4_par.dir/f90tst_nc4_par.F90.o
[ 60%] Linking Fortran executable f90tst_nc4_par
[ 60%] Built target f90tst_nc4_par
[ 61%] Building Fortran object nf03_test4/CMakeFiles/f90tst_parallel_fill.dir/f90tst_parallel_fill.F90.o
[ 62%] Linking Fortran executable f90tst_parallel_fill
[ 62%] Built target f90tst_parallel_fill
[ 63%] Building Fortran object nf03_test4/CMakeFiles/f90tst_parallel_compressed.dir/f90tst_parallel_compressed.F90.o
[ 63%] Linking Fortran executable f90tst_parallel_compressed
[ 63%] Built target f90tst_parallel_compressed
[ 64%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars.dir/f90tst_vars.F90.o
[ 65%] Linking Fortran executable f90tst_vars
[ 65%] Built target f90tst_vars
[ 65%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars_vlen.dir/f90tst_vars_vlen.F90.o
[ 66%] Linking Fortran executable f90tst_vars_vlen
[ 66%] Built target f90tst_vars_vlen
[ 67%] Building Fortran object nf03_test4/CMakeFiles/f90tst_grps.dir/f90tst_grps.F90.o
[ 67%] Linking Fortran executable f90tst_grps
[ 67%] Built target f90tst_grps
[ 68%] Building Fortran object nf03_test4/CMakeFiles/f90tst_fill.dir/f90tst_fill.F90.o
[ 68%] Linking Fortran executable f90tst_fill
[ 68%] Built target f90tst_fill
[ 69%] Building Fortran object nf03_test4/CMakeFiles/f90tst_fill2.dir/f90tst_fill2.F90.o
[ 70%] Linking Fortran executable f90tst_fill2
[ 70%] Built target f90tst_fill2
[ 70%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars3.dir/f90tst_vars3.F90.o
[ 71%] Linking Fortran executable f90tst_vars3
[ 71%] Built target f90tst_vars3
[ 72%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars4.dir/f90tst_vars4.F90.o
[ 72%] Linking Fortran executable f90tst_vars4
[ 72%] Built target f90tst_vars4
[ 72%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars2.dir/f90tst_vars2.F90.o
[ 73%] Linking Fortran executable f90tst_vars2
[ 73%] Built target f90tst_vars2
[ 73%] Building Fortran object nf03_test4/CMakeFiles/f90tst_path.dir/f90tst_path.F90.o
[ 74%] Linking Fortran executable f90tst_path
[ 74%] Built target f90tst_path
[ 74%] Building Fortran object nf03_test4/CMakeFiles/f90tst_rengrps.dir/f90tst_rengrps.F90.o
[ 75%] Linking Fortran executable f90tst_rengrps
[ 75%] Built target f90tst_rengrps
[ 76%] Building Fortran object nf03_test4/CMakeFiles/f90tst_nc4.dir/f90tst_nc4.F90.o
[ 76%] Linking Fortran executable f90tst_nc4
[ 76%] Built target f90tst_nc4
[ 77%] Building Fortran object nf03_test4/CMakeFiles/f90tst_types.dir/f90tst_types.F90.o
[ 77%] Linking Fortran executable f90tst_types
[ 77%] Built target f90tst_types
[ 78%] Building Fortran object nf03_test4/CMakeFiles/f90tst_types2.dir/f90tst_types2.F90.o
[ 78%] Linking Fortran executable f90tst_types2
[ 78%] Built target f90tst_types2
[ 78%] Building Fortran object nf03_test4/CMakeFiles/f90tst_zstandard.dir/f90tst_zstandard.F90.o
[ 79%] Linking Fortran executable f90tst_zstandard
[ 79%] Built target f90tst_zstandard
[ 80%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars5.dir/f90tst_vars5.F90.o
[ 81%] Linking Fortran executable f90tst_vars5
[ 81%] Built target f90tst_vars5
[ 81%] Building Fortran object nf03_test4/CMakeFiles/f90tst_flarge.dir/f90tst_flarge.F90.o
[ 82%] Linking Fortran executable f90tst_flarge
[ 82%] Built target f90tst_flarge
[ 82%] Building Fortran object examples/F77/CMakeFiles/F77_tests_simple_xy_wr.dir/simple_xy_wr.F.o
[ 83%] Linking Fortran executable F77_tests_simple_xy_wr
[ 83%] Built target F77_tests_simple_xy_wr
[ 84%] Building Fortran object examples/F77/CMakeFiles/F77_tests_simple_xy_rd.dir/simple_xy_rd.F.o
[ 85%] Linking Fortran executable F77_tests_simple_xy_rd
[ 85%] Built target F77_tests_simple_xy_rd
[ 86%] Building Fortran object examples/F77/CMakeFiles/F77_tests_sfc_pres_temp_wr.dir/sfc_pres_temp_wr.F.o
/startdir/src/netcdf-fortran/examples/F77/sfc_pres_temp_wr.F:126:59:
105 | retval = nf_def_var(ncid, LAT_NAME, NF_REAL, 1, lat_dimid,
| 2
......
126 | retval = nf_def_var(ncid, PRES_NAME, NF_REAL, NDIMS, dimids,
| 1
Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
/startdir/src/netcdf-fortran/examples/F77/sfc_pres_temp_wr.F:129:59:
105 | retval = nf_def_var(ncid, LAT_NAME, NF_REAL, 1, lat_dimid,
| 2
......
129 | retval = nf_def_var(ncid, TEMP_NAME, NF_REAL, NDIMS, dimids,
| 1
Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
[ 86%] Linking Fortran executable F77_tests_sfc_pres_temp_wr
[ 86%] Built target F77_tests_sfc_pres_temp_wr
[ 87%] Building Fortran object examples/F77/CMakeFiles/F77_tests_sfc_pres_temp_rd.dir/sfc_pres_temp_rd.F.o
[ 87%] Linking Fortran executable F77_tests_sfc_pres_temp_rd
[ 87%] Built target F77_tests_sfc_pres_temp_rd
[ 87%] Building Fortran object examples/F77/CMakeFiles/F77_tests_pres_temp_4D_wr.dir/pres_temp_4D_wr.F.o
/startdir/src/netcdf-fortran/examples/F77/pres_temp_4D_wr.F:149:59:
124 | retval = nf_def_var(ncid, LAT_NAME, NF_REAL, 1, lat_dimid,
| 2
......
149 | retval = nf_def_var(ncid, PRES_NAME, NF_REAL, NDIMS, dimids,
| 1
Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
/startdir/src/netcdf-fortran/examples/F77/pres_temp_4D_wr.F:152:59:
124 | retval = nf_def_var(ncid, LAT_NAME, NF_REAL, 1, lat_dimid,
| 2
......
152 | retval = nf_def_var(ncid, TEMP_NAME, NF_REAL, NDIMS, dimids,
| 1
Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
[ 88%] Linking Fortran executable F77_tests_pres_temp_4D_wr
[ 88%] Built target F77_tests_pres_temp_4D_wr
[ 88%] Building Fortran object examples/F77/CMakeFiles/F77_tests_pres_temp_4D_rd.dir/pres_temp_4D_rd.F.o
[ 89%] Linking Fortran executable F77_tests_pres_temp_4D_rd
[ 89%] Built target F77_tests_pres_temp_4D_rd
[ 89%] Building Fortran object examples/F90/CMakeFiles/F90_tests_simple_xy_wr.dir/simple_xy_wr.F90.o
[ 90%] Linking Fortran executable F90_tests_simple_xy_wr
[ 90%] Built target F90_tests_simple_xy_wr
[ 90%] Building Fortran object examples/F90/CMakeFiles/F90_tests_simple_xy_rd.dir/simple_xy_rd.F90.o
[ 91%] Linking Fortran executable F90_tests_simple_xy_rd
[ 91%] Built target F90_tests_simple_xy_rd
[ 92%] Building Fortran object examples/F90/CMakeFiles/F90_tests_sfc_pres_temp_wr.dir/sfc_pres_temp_wr.F90.o
[ 93%] Linking Fortran executable F90_tests_sfc_pres_temp_wr
[ 93%] Built target F90_tests_sfc_pres_temp_wr
[ 94%] Building Fortran object examples/F90/CMakeFiles/F90_tests_sfc_pres_temp_rd.dir/sfc_pres_temp_rd.F90.o
[ 94%] Linking Fortran executable F90_tests_sfc_pres_temp_rd
[ 94%] Built target F90_tests_sfc_pres_temp_rd
[ 95%] Building Fortran object examples/F90/CMakeFiles/F90_tests_pres_temp_4D_wr.dir/pres_temp_4D_wr.F90.o
[ 95%] Linking Fortran executable F90_tests_pres_temp_4D_wr
[ 95%] Built target F90_tests_pres_temp_4D_wr
[ 95%] Building Fortran object examples/F90/CMakeFiles/F90_tests_pres_temp_4D_rd.dir/pres_temp_4D_rd.F90.o
[ 96%] Linking Fortran executable F90_tests_pres_temp_4D_rd
[ 96%] Built target F90_tests_pres_temp_4D_rd
[ 97%] Building Fortran object examples/F90/CMakeFiles/simple_xy_par_wr.dir/simple_xy_par_wr.F90.o
[ 97%] Linking Fortran executable simple_xy_par_wr
[ 97%] Built target simple_xy_par_wr
[ 98%] Building Fortran object examples/F90/CMakeFiles/simple_xy_par_rd.dir/simple_xy_par_rd.F90.o
[ 98%] Linking Fortran executable simple_xy_par_rd
[ 98%] Built target simple_xy_par_rd
[ 99%] Building Fortran object examples/F90/CMakeFiles/simple_xy_par_wr2.dir/simple_xy_par_wr2.F90.o
[100%] Linking Fortran executable simple_xy_par_wr2
[100%] Built target simple_xy_par_wr2
[100%] Built target manpage
make: Leaving directory '/startdir/src/build'
==> Starting check()...
make: Entering directory '/startdir/src/build'
Running tests...
Test project /startdir/src/build
Start 1: nf_test
1/53 Test #1: nf_test .......................... Passed 0.18 sec
Start 2: tst_int64
2/53 Test #2: tst_int64 ........................ Passed 0.06 sec
Start 3: tst_f77_v2
3/53 Test #3: tst_f77_v2 ....................... Passed 0.06 sec
Start 4: ftest
4/53 Test #4: ftest ............................ Passed 0.06 sec
Start 5: tst_f90
5/53 Test #5: tst_f90 .......................... Passed 0.06 sec
Start 6: tst_fill_int64
6/53 Test #6: tst_fill_int64 ................... Passed 0.06 sec
Start 7: ftst_groups
7/53 Test #7: ftst_groups ...................... Passed 0.09 sec
Start 8: ftst_vars
8/53 Test #8: ftst_vars ........................ Passed 0.08 sec
Start 9: ftst_vars2
9/53 Test #9: ftst_vars2 ....................... Passed 0.09 sec
Start 10: ftst_vars3
10/53 Test #10: ftst_vars3 ....................... Passed 0.07 sec
Start 11: ftst_vars4
11/53 Test #11: ftst_vars4 ....................... Passed 0.07 sec
Start 12: ftst_vars5
12/53 Test #12: ftst_vars5 ....................... Passed 0.08 sec
Start 13: ftst_vars6
13/53 Test #13: ftst_vars6 ....................... Passed 0.07 sec
Start 14: ftst_types
14/53 Test #14: ftst_types ....................... Passed 0.07 sec
Start 15: ftst_types2
15/53 Test #15: ftst_types2 ...................... Passed 0.08 sec
Start 16: ftst_types3
16/53 Test #16: ftst_types3 ...................... Passed 0.08 sec
Start 17: ftst_path
17/53 Test #17: ftst_path ........................ Passed 0.07 sec
Start 18: ftst_rengrps
18/53 Test #18: ftst_rengrps ..................... Passed 0.07 sec
Start 19: f03tst_open_mem
19/53 Test #19: f03tst_open_mem .................. Passed 0.07 sec
Start 20: ftst_var_compact
20/53 Test #20: ftst_var_compact ................. Passed 0.07 sec
Start 21: ftst_zstandard
21/53 Test #21: ftst_zstandard ................... Passed 0.07 sec
Start 22: ftst_v2
22/53 Test #22: ftst_v2 .......................... Passed 0.08 sec
Start 23: ftst_var_szip
23/53 Test #23: ftst_var_szip .................... Passed 0.07 sec
Start 24: F90_tests_run_f90_par_test
24/53 Test #24: F90_tests_run_f90_par_test .......***Failed 4.87 sec
Start 25: f90tst_vars
25/53 Test #25: f90tst_vars ...................... Passed 0.09 sec
Start 26: f90tst_vars_vlen
26/53 Test #26: f90tst_vars_vlen ................. Passed 0.01 sec
Start 27: f90tst_grps
27/53 Test #27: f90tst_grps ...................... Passed 0.08 sec
Start 28: f90tst_fill
28/53 Test #28: f90tst_fill ...................... Passed 0.07 sec
Start 29: f90tst_fill2
29/53 Test #29: f90tst_fill2 ..................... Passed 0.07 sec
Start 30: f90tst_vars3
30/53 Test #30: f90tst_vars3 ..................... Passed 0.07 sec
Start 31: f90tst_vars4
31/53 Test #31: f90tst_vars4 ..................... Passed 0.10 sec
Start 32: f90tst_vars2
32/53 Test #32: f90tst_vars2 ..................... Passed 0.07 sec
Start 33: f90tst_path
33/53 Test #33: f90tst_path ...................... Passed 0.07 sec
Start 34: f90tst_rengrps
34/53 Test #34: f90tst_rengrps ................... Passed 0.08 sec
Start 35: f90tst_nc4
35/53 Test #35: f90tst_nc4 ....................... Passed 0.10 sec
Start 36: f90tst_types
36/53 Test #36: f90tst_types ..................... Passed 0.08 sec
Start 37: f90tst_types2
37/53 Test #37: f90tst_types2 .................... Passed 0.08 sec
Start 38: f90tst_zstandard
38/53 Test #38: f90tst_zstandard ................. Passed 0.19 sec
Start 39: f90tst_vars5
39/53 Test #39: f90tst_vars5 ..................... Passed 0.13 sec
Start 40: f90tst_flarge
40/53 Test #40: f90tst_flarge .................... Passed 2.44 sec
Start 41: F77_tests_simple_xy_wr
41/53 Test #41: F77_tests_simple_xy_wr ........... Passed 0.06 sec
Start 42: F77_tests_simple_xy_rd
42/53 Test #42: F77_tests_simple_xy_rd ........... Passed 0.06 sec
Start 43: F77_tests_sfc_pres_temp_wr
43/53 Test #43: F77_tests_sfc_pres_temp_wr ....... Passed 0.06 sec
Start 44: F77_tests_sfc_pres_temp_rd
44/53 Test #44: F77_tests_sfc_pres_temp_rd ....... Passed 0.06 sec
Start 45: F77_tests_pres_temp_4D_wr
45/53 Test #45: F77_tests_pres_temp_4D_wr ........ Passed 0.06 sec
Start 46: F77_tests_pres_temp_4D_rd
46/53 Test #46: F77_tests_pres_temp_4D_rd ........ Passed 0.06 sec
Start 47: F90_tests_simple_xy_wr
47/53 Test #47: F90_tests_simple_xy_wr ........... Passed 0.06 sec
Start 48: F90_tests_simple_xy_rd
48/53 Test #48: F90_tests_simple_xy_rd ........... Passed 0.06 sec
Start 49: F90_tests_sfc_pres_temp_wr
49/53 Test #49: F90_tests_sfc_pres_temp_wr ....... Passed 0.06 sec
Start 50: F90_tests_sfc_pres_temp_rd
50/53 Test #50: F90_tests_sfc_pres_temp_rd ....... Passed 0.06 sec
Start 51: F90_tests_pres_temp_4D_wr
51/53 Test #51: F90_tests_pres_temp_4D_wr ........ Passed 0.06 sec
Start 52: F90_tests_pres_temp_4D_rd
52/53 Test #52: F90_tests_pres_temp_4D_rd ........ Passed 0.06 sec
Start 53: f90_tests_run_f90_par_examples
53/53 Test #53: f90_tests_run_f90_par_examples ... Passed 4.48 sec
98% tests passed, 1 tests failed out of 53
Total Test time (real) = 15.57 sec
The following tests FAILED:
24 - F90_tests_run_f90_par_test (Failed)
Errors while running CTest
Output from these tests are in: /startdir/src/build/Testing/Temporary/LastTest.log
Use "--rerun-failed --output-on-failure" to re-run the failed cases verbosely.
make: *** [Makefile:71: test] Error 8
make: Leaving directory '/startdir/src/build'
==> ERROR: A failure occurred in check().
Aborting...
==> ERROR: Build failed, check /home/alhp/workspace/chroot/build_0c6b60bd-6873-4b69-b401-8c82a8c7d366/build