Package Download_score rnaseqGene 140 highthroughputassays 28 proteomics 7 chipseqDB 28 liftOver 251 arrays 38 eQTL 7 sequencing 35 generegulation 26 variants 33 annotation 49 simpleSingleCell 41 methylationArrayAnalysis 131 RNAseq123 103 ExpressionNormalizationWorkflow 29 RnaSeqGeneEdgeRQL 50 EGSEA123 26 TCGAWorkflow 52 recountWorkflow 27 testproj 0 cytofWorkflow 66 rnaseqDTU 43 BiocMetaWorkflow 25 maEndToEnd 62 SingscoreAMLMutations 26 BgeeCall 2 csawUsersGuide 25 CAGEWorkflow 24 fluentGenomics 27 BP4RNAseq 21 ExpHunterSuite 24 GeoMxWorkflows 167 AnnotationDbi 14 formatR 21 MASS 342 rlang 416 knitr 274 checkmate 203 devtools 7 memoise 8 sessioninfo 7 remotes 153 fansi 110 Matrix 386 scales 79 RColorBrewer 12 tidyr 220 readr 85 globals 60 rsconnect 29 packrat 10 evaluate 384 htmltools 305 webshot 10 desc 63 pkgload 285 plyr 58 formatters 7 IRanges 3 openssl 438 blob 31 plotly 67 clusterprofielr 0 BiocManager 340 curatedMetagenomicData 0 Biobase 8 gtable 245 hms 27 highr 172 msigdbr 1 BiocParallel 5 nloptr 63 rngtools 2 SparseM 73 polspline 3 multcomp 113 hexbin 16 mice 5 Rgraphviz 1 roxygen2 150 rpart 50 bookdown 19 brew 25 pdftools 2 restfulr 3 batchelor 1 htmlwidgets 85 codetools 94 sjPlot 2 raster 10 terra 28 GLAD 0 BSgenome 3 bit 142 tweenr 40 h2o 3 lares 1 rpart.plot 1 rematch2 1 shinyjs 4 future.apply 174 sfsmisc 3 shinycssloaders 19 pkgconfig 2 tidytree 23 writexl 27 Rdpack 19 RobustRankAggreg 0 ggsignif 6 future.callr 2 qqconf 1 FactoMineR 12 sp 71 aplot 40 visNetwork 3 deSolve 3 dittodb 0 campsismod 0 evd 4 epiR 2 webmockr 0 xaringanthemer 1 furrr 3 fork 1 forecast 7 ggPMX 0 gamlss.dist 3 interp 10 ipaddress 0 jsTreeR 1 klaR 4 lpSolveAPI 1 paletteer 12 precommit 1 partitions 0 pins 6 prismatic 12 pointblank 1 pmtables 1 randtoolbox 1 Rsmlx 0 R.rsp 0 rclipboard 5 rhub 3 s2 25 recipes 40 spatialreg 0 tracee 1 profile 0 spaMM 1 spam 18 reda 0 sparklyr 2 statmod 3 vaultr 1 sensitivity 1 collections 0 brms 2 Exact 5 dotCall64 19 doBy 14 esquisse 16 conquer 2 gridtext 3 dtw 0 dtwclust 2 languageserver 1 nonmemica 1 lgr 1 NMdata 3 memisc 1 pagedown 2 PKNCA 1 network 2 pkgdepends 9 padr 1 pkgcache 9 smoothHR 0 riskRegression 1 stringdist 6 wk 28 Runuran 1 ucminf 7 shinySelect 0 yardstick 11 tfruns 4 amgen.okta.client 0 genefilter 2 DOSE 2 circlize 40 shape 61 lsa 1 org.Rn.eg.db 1 rtkore 0 HandTill2001 0 gplots 151 gWidgets2tcltk 0 BiasedUrn 1 Cubist 1 doRNG 6 bigreadr 1 fracdiff 4 quarto 6 nlmixr2data 0 servr 6 npde 0 timereg 1 proj4 4 rxode2et 1 rvg 2 rngWELL 1 vcr 0 mclogit 0 units 13 ks 7 keyring 1 huxtable 4 timechange 170 clusterProfiler 3 assertive.properties 2 Gviz 2 RPostgres 100 ipred 22 bit64 124 singleCellTK 0 cxAnalysis 0 AnVIL 0 RcppAnnoy 20 spatstat.utils 42 spatstat.geom 44 uwot 128 FNN 154 enrichR 3 shinyalert 19 Markdown 0 GMD 0 expm 13 survMisc 1 imcRtools 0 mixOmics 1 tibble 20 viridisLite 36 xfun 411 clipr 8 credentials 66 glue 213 cli 365 tidyselect 284 nlme 204 cpp11 269 vroom 69 tzdb 31 xml2 105 future 189 latticeExtra 6 httpuv 272 rmarkdown 368 systemfonts 262 XML 121 GenomeInfoDbData 4 DT 108 dbplyr 207 class 29 GenomeInfoDb 8 targets 10 KEGGREST 3 MatrixGenerics 1 yaml 303 viridis 179 shinyWidgets 80 lattice 147 matrixStats 210 lifecycle 93 mime 18 shinyBS 2 crayon 217 crosstalk 63 S4Vectors 7 PhosR 0 BiocVersion 9 Homo.sapiens 0 forcats 9 isoband 24 lubridate 85 tidyverse 10 googlesheets4 14 mnormt 4 kohonen 1 progress 80 MatrixModels 33 sandwich 18 spData 14 irr 0 lpSolve 13 gdata 34 GenomicRanges 6 multtest 1 qvalue 1 sys 144 hwriter 2 weights 3 zoo 26 Formula 9 labeling 62 usethis 161 polyclip 73 colourpicker 4 jose 2 seqinr 5 shinytest 3 ssh 4 aws.signature 1 MutationalPatterns 0 scatterpie 51 MCPcounter 0 GenomicAlignments 3 sn 2 distr 1 qap 3 car 32 maptools 6 bsplus 1 broom.helpers 22 arm 5 cem 0 bbr 1 binr 0 arrow 13 dfidx 1 clinPK 0 cmdstanr 1 datamods 17 doMC 2 Epi 3 cubature 2 estimability 26 fda 3 flexdashboard 2 dm 1 downlit 117 workflowsets 4 xaringan 1 ggeffects 3 gtsummary 6 ggdist 6 lambdr 0 lotri 0 lavaan 5 metafor 6 nhanesA 0 performance 14 plm 1 partykit 3 pkgdown 155 plumber 19 paws.common 109 parameters 15 RMariaDB 19 scico 1 spacetime 3 systemfit 0 tidymodels 5 urca 7 timeDate 31 tarchetypes 7 DBItest 1 chron 3 gghighlight 1 irlba 6 learnr 3 ggtext 4 ggridges 25 DescTools 10 mets 1 n1qn1 0 latex2exp 1 protolite 1 paws.application.integration 9 rainbow 2 officer 17 matrixcalc 1 RSEIS 1 vegawidget 0 statnet.common 2 rsvg 3 scidb 0 GOSemSim 2 idr 0 VennDiagram 2 GlobalOptions 1 GetoptLong 3 rjson 64 pkgmaker 2 SnowballC 4 cowplot 72 rhdf5 2 blockcluster 0 DRR 0 glmnet 8 ggtree 3 sjstats 1 babelmixr2 1 badger 1 AsioHeaders 4 foghorn 0 lhs 6 mapproj 2 nlmixr2 1 RcppGSL 2 reactable 1 Rook 1 MatchIt 4 pmforest 1 assertr 2 lava 37 slider 10 shinybusy 16 rxode2parse 1 shinyMobile 0 sensobol 1 rxode2ll 1 yaImpute 2 rxode2random 1 tensorflow 4 whisker 10 ordinal 9 pbapply 13 cytolib 1 org.Hs.eg.db 3 shinyjqui 1 scPipe 0 biomaRt 1 biostatUtil 0 PerformanceAnalytics 1 Rd2roxygen 0 SummarizedExperiment 3 bbmle 3 metap 3 leiden 12 scattermore 5 sctransform 10 goftest 1 deldir 34 VAM 1 textshaping 198 KernSmooth 73 DelayedMatrixStats 2 hdf5r 18 lazyeval 1 exactRankTests 1 pcaExplorer 0 variancePartition 1 BiocGenerics 8 BiocInstaller 1 oligo 1 rols 0 pillar 94 lme4 102 survival 238 pkgbuild 161 stringr 88 stringi 344 mgcv 166 colorspace 170 rstudioapi 148 parallelly 200 uuid 220 gtools 27 Hmisc 44 htmlTable 35 svglite 14 bslib 354 brio 171 rprojroot 63 proxy 2 emmeans 36 RSQLite 181 Biostrings 6 foreach 6 heatmaply 5 seriation 34 withr 272 RcppArmadillo 226 jsonlite 246 shinydashboard 3 DMRcate 1 BH 207 fs 262 haven 49 polynom 2 reprex 72 R6 40 psych 115 labelled 23 bibtex 2 doParallel 4 registry 1 pROC 15 TH.data 106 diceR 1 clusterCrit 1 clue 63 questionr 1 classInt 15 coin 1 zip 165 graph 1 glmmADMB 0 INLA 0 IRkernel 1 curl 397 qpdf 3 rmdformats 1 R.methodsS3 6 R.oo 65 R.utils 41 lmtest 4 backports 145 diffobj 3 waldo 188 markdown 90 base64enc 1 rversions 7 gh 141 gitcreds 6 ggforce 39 BiocFileCache 4 parsedate 3 webdriver 0 later 159 reshape2 3 yulab.utils 60 ggrepel 233 treeio 1 rbibutils 14 ggpubr 10 rstatix 7 listenv 49 mathjaxr 1 ellipse 9 Cairo 13 edgeR 2 av 1 admiral 2 asciicast 1 blogdown 0 coro 1 covr 5 csv 1 WeightIt 3 flexsurv 1 flextable 17 gmm 1 gt 49 corrr 0 gam 3 geepack 8 geometry 1 glmmTMB 4 gnm 1 golem 11 hardhat 40 gbm 100 JM 0 infer 4 lobstr 2 mlr3measures 2 mrgsolve 1 modeldata 3 NonCompart 1 optmatch 3 parsnip 7 paradox 2 narray 0 pcaPP 13 randomForestSRC 3 pls 3 RPostgreSQL 4 RBesT 1 rrcov 18 RcppCCTZ 1 rsample 11 sortable 3 RItools 2 ranger 30 shiny.router 1 splines2 1 svd 2 transformr 0 robust 10 V8 100 admiral.test 0 ggcorrplot 2 admiraldev 2 crul 121 gee 2 gganimate 1 DHARMa 1 ergm 0 hunspell 50 httr2 174 distill 0 mrgda 1 mlr3misc 2 GA 104 ndjson 0 pracma 10 pak 3 RMySQL 5 NMproject 1 reactlog 1 Rwave 1 tables 2 RSiena 0 jomo 1 Rttf2pt1 1 tseries 8 xts 36 tictoc 11 RSpectra 95 Tplyr 2 rtracklayer 3 RCircos 0 plotrix 7 permute 1 MOFA2 1 CVST 0 magic 1 mvtnorm 89 caTools 37 forrester.metadata 0 viridislite 0 dlstats 0 bs4Dash 8 boot 87 mrgvalidate 1 changepoint 25 keras 2 nlmixr2plot 1 Rcsdp 0 RODBC 2 repurrrsive 1 rgeos 4 rxode2 1 PKI 8 RsSimulx 0 xpose 0 dials 9 nlmixr2extra 1 gettz 0 vioplot 1 mc2d 2 mapdata 1 morpheus 0 carData 2 XVector 2 rvcheck 4 BSgenome.Hsapiens.UCSC.hg38 2 cmprsk 4 assertthat 1 prodlim 29 numDeriv 1 ccaPP 0 quadprog 1 Seurat 37 ggplotify 9 googledrive 14 rcmdcheck 3 svMisc 1 spatstat.data 38 sitmo 2 ClusterR 1 bitops 143 reactome.db 2 fastmatch 23 survminer 7 xtable 3 ExploreModelMatrix 0 snow 7 data.table 380 farver 198 Rcpp 358 cluster 82 commonmark 248 httr 64 generics 15 vctrs 107 ggplot2 317 gert 116 fontawesome 129 shiny 300 tinytex 378 callr 267 processx 294 ps 343 sass 288 testthat 289 RCurl 177 readxl 32 DBI 327 e1071 96 limma 10 locfit 99 iterators 6 dplyr 91 dendextend 53 magrittr 10 renv 110 TSP 5 BSgenome.Hsapiens.UCSC.hg19 1 modelr 12 rvest 164 reticulate 87 flowWorkspaceData 0 gargle 21 modeltools 1 RcppEigen 153 Rtsne 20 mclust 15 rms 4 quantreg 80 apcluster 1 fastmap 238 dbscan 6 tidygraph 28 igraph 176 AUCell 1 shinythemes 1 xgboost 118 broom 126 openxlsx 98 annotate 2 optparse 41 rapportools 1 purrr 82 digest 428 nnet 34 expss 1 ellipsis 5 foreign 56 utf8 91 DESeq2 6 WGCNA 7 png 27 dtplyr 9 patchwork 88 pingr 18 pool 12 segmented 24 config 9 prettyunits 65 promises 290 babelgene 1 ggraph 33 graphlayouts 54 shadowtext 43 dittoSeq 1 org.Mm.eg.db 2 seqpac 25 ape 59 robustbase 30 minqa 86 scatterplot3d 3 ggfun 64 DEoptimR 15 emayili 2 caret 28 collapse 1 datawizard 17 clock 23 cobalt 1 drake 2 dockerfiler 1 fields 10 duckdb 5 workflows 4 ymlthis 0 gld 2 gmp 9 insight 21 ggdag 1 lbfgs 0 mlr3 3 nleqslv 1 ParamHelpers 1 posterior 3 R.cache 1 palmerpenguins 1 rstpm2 1 projpred 1 RApiSerialize 9 qs 11 paws.compute 94 rgl 5 saemix 0 rticles 1 sf 39 TMB 13 tune 6 sm 1 tidyposterior 1 distributional 7 Brobdingnag 1 dparser 1 gsDesign 2 fixest 1 lintr 110 bayestestR 13 flexclust 3 ggRandomForests 0 mapbayr 0 JuliaCall 0 iml 1 BBmisc 1 mlr 2 mrgmisc 1 osqp 3 party 92 progressr 43 ragg 240 scam 1 rstan 5 RefManageR 1 templater 1 vegan 45 webfakes 0 ComplexHeatmap 3 GeomxTools 0 ade4 3 dichromat 5 NMF 7 genefu 0 kernlab 57 ddalpha 1 gower 12 inum 2 libcoin 3 pamr 1 randomForest 41 minpack.lm 3 pcaMethods 1 cubelyr 0 bigD 19 eha 1 DEoptim 0 juicyjuice 0 HDInterval 1 Matching 4 jpeg 11 nlmixr2lib 1 log4r 1 RcppDE 0 mrgvalprep 1 nlmixr2est 1 slickR 0 NMcalc 0 gap 1 gamlss 4 styler 18 rmutil 1 XLConnect 2 maps 13 msm 3 nanotime 2 tidyvpc 1 survivalROC 1 GPArotation 1 ggbeeswarm 4 modelenv 4 RApiDatetime 1 shinyFiles 4 Peptides 1 RClickhouse 0 aws.s3 1 ggstatsplot 3 DelayedArray 4 castor 1 SingleCelLExperiment 0 decoupleR 1 km.ci 1 ModelMetrics 1 dimRed 0 nanostringr 0 filelock 37 pheatmap 0 Bioconductor 1 BiocIO 1 Rhdf5lib 2 scater 1 bdsmatrix 6 reldist 1 fitdistrplus 27 ica 3 rex 2 SeuratObject 26 spatstat.core 3 spatstat.sparse 29 cachem 336 benchmarkme 1 magick 24 RcppHNSW 18 pdist 1 spatial 24 motifmatchr 2 SBGNview.data 0 MACSr 0 blastula 0 clustermq 3 connectwidgets 0 org.Dm.eg.db 0 bioc::GenomeInfoDbData 0 SDMTools 1 fpc 94 mixtools 1 argparse 7 ggrastr 2 rjags 3 GO.db 2 paws.machine.learning 9 earth 2 gdtools 115 shapr 0 RJSONIO 5 visdat 1 ff 3 filesstrings 1 slackr 1 lm.beta 1 paws.end.user.computing 9 paws.developer.tools 9 paws.customer.engagement 9 paws.networking 9 PFIM 0 tikzDevice 1 pbkrtest 47 uatools 0 AMARETTO 0 ncdfFlow 0 ggmap 0 ggformula 2 bold 2 txtq 0 spicyWorkflow 48 omicsbase 0 httpgd 2 table1 3 colourvalues 0 ggfittext 2 miscTools 1 profvis 51 quantmod 9 ROI 1 norm 2 survey 5 rzmq 1 xgxr 0 spelling 6 showtext 3 MSstatsTMTs 0 metabaser 1 MSstatsTMT 0 myphd 0 CRISPR.shinyapp 0 spatstat.random 39 rgbif 1 attachment 1 shinydashboardPlus 13 RestRserve 2 Rserve 3 pammtools 0 DEsingle 1 TCC 1 taxize 3 rredlist 1 scrypt 3 BiocNeighbors 2 tidycensus 3 densEstBayes 1 zCompositions 2 DEP 1 flowClust 1 BSgenome.Hsapiens.NCBI.GRCh38 0 jquerylib 1 crew 3 tableHTML 1 extrafont 1 RJDBC 0 ttservice 1 ImpulseDE2 0 xlsx 1 Rmpi 1 Rvmmin 2 dqrng 42 pixmap 13 tiff 2 inline 3 rBLAST 1 SoupX 1 bnlearn 2 sparsebn 1 argusDS.DB.manager.utilities 1 argusDS.gamlss.forecast 2 spsComps 0 argusDS.Studio.MyStudio 2 gamboostLSS 2 GEOquery 1 ggdendro 10 apeglm 1 tidySummarizedExperiment 0 tmvtnorm 2 hash 1 tsfeatures 1 ggiraph 13 flair 0 texreg 2 tidytext 4 logr 1 argusDS.gamlss.testing 3 qqman 1 confintr 1 effectsize 11 statsExpressions 3 argusDS.driver.importance 2 rnaseqgene 0 biocmetaworkflow 0 cytofworkflow 0 mlpack 1 sjmisc 2 missRanger 2 scDblFinder 2 rice 1 BSgenome.Hsapiens.1000genomes.hs37d5 0 microseq 0 Rfit 1 vdiffr 1 shinyvalidate 4 geomorph 0 RRPP 0 treespace 0 googleVis 1 thematic 3 linprog 1 phylosignal 0 doSNOW 1 Momocs 0 pals 6 coda 12 UCell 1 logitnorm 1 warp 5 factoextra 0 stars 13 gamm4 0 nanonext 3 argusDS.PossibilityCurves.utils 1 OmnipathR 1 BgeeDB 0 shinyLP 0 celldex 1 psychometric 0 GSEABase 1 ldap 0 shinyauth 0 argusDS.Studio.APC 0 Delaporte 0 seqminer 2 sda 1 clValid 1 gmodels 1 ritis 0 solrium 0 sme 0 scCustomize 2 spatstat.model 5 zen4R 0 intamap 0 AICcmodavg 0 MODIStsp 0 gestalt 1 string 0 rliger 1 bio3d 2 dbx 2 missMDA 1 mlr3learners 2 MESS 2 grImport2 1 mcmc 1 Rhtslib 2 PROJ 1 qlcMatrix 3 argusDS.gamlss.distributions 1 gRbase 1 argusDS.Studio.FC 0 argusDS.possibility.curves.daily 1 iq 0 pandoc 0 capushe 1 tm 6 strucchange 1 gghalves 0 xcms 1 processCore 0 affyio 1 smldesign 1 hgu95a.db 0 seurat 1 BASiCS 1 embed 1 pathfindR.data 1 tergm 0 alembic 0 pmartR 1 dynplot 0 propr 0 Rmagic 1 EnvStats 4 stevedore 1 sccore 1 mirai 4 SAIGEgds 0 BSgenome.Ggallus.ENSEMBL.galGal6 0 cvms 1 REBayes 0 RcppSpdlog 1 bbr.bayes 1 glmnetUtils 0 pharmaversesdtm 0 prompt 1 dlookr 0 finalfit 1 metabolomics 0 scda 0 lambda.r 1 annotatr 0 umap 3 abc 0 googleAuthR 3 googleCloudStorageR 0 argusDS.tabulator 3 phonTools 0 MPV 1 splancs 3 blockForest 1 duct.tape 1 LDplots 0 datapasta 1 alakazam 1 mpm 0 pinfsc50 1 promise 0 lpsymphony 1 tableone 0 qtl2 1 NanoStringNCTools 0 org.Ss.eg.db 0 g3viz 1 poolfstat 1 WikidataR 0 xopen 34 orthogene 0 vsn 1 pvca 0 biostatR 0 BSgenome.Mmulatta.NCBI.mmul10.tmp 0 stinepack 4 abind 72 CAMERA 0 AGHmatrix 0 TrajectoryUtils 0 glassoFast 1 compareDF 1 dasnormalize.iomel 0 tximportDat 0 canvasXpress 0 checkr 0 usmap 0 dttr2 0 periscope 0 RSclient 1 qqplotr 0 ReactomeGSA 0 statTarget 0 assertive.code 1 almanac 0 mda 1 fastcluster 5 MPA 0 DiffBind 1 ResidualMatrix 1 igvShiny 1 matrixTests 1 teal.modules.general 1 amgsafetyvis 1 amlogger 0 engitix.singlecell.db 1 crosstable 1 argusDS.GlobalSettings 1 GeneralizedHyperbolic 2 ggnewscale 53 ggfortify 3 ggstance 3 pbkrest 0 ScaledMatrix 1 sourcetools 18 liana 1 TFMPvalue 1 ensembldb 4 spatstat 6 plotgardener 0 d3r 0 clinfun 0 ggeasy 0 RhpcBLASctl 1 brglm2 1 mockr 1 leaflet 8 rstantools 3 review 1 heemod 0 filehash 1 shinyglide 0 mvnfast 0 paws.database 9 mrggsave 1 paws.management 9 vcd 4 strex 2 tidybayes 1 xslt 3 paws.analytics 9 corrplot 46 flowWorkspace 0 AnnotationHub 2 biomformat 1 ChIPseeker 1 DO.db 1 EnhancedVolcano 1 RGCCA 0 multcompView 13 rootSolve 2 InkblotAnalytics 0 billboarder 6 httpcode 1 clusterGeneration 2 storr 0 gggenes 1 maketools 7 PreciseSums 0 rlecuyer 0 Rglpk 1 shinytest2 32 speedglm 1 MNP 1 phangorn 4 ecodist 1 Ziploc 1 Sigfried 1 recosystem 0 misc3d 0 plot3D 4 ggnewscales 0 futile.logger 1 box 9 leidenbase 6 baySeq 1 rotl 2 rncl 1 mockery 2 geometries 17 TSCAN 0 cplm 1 qdapTools 1 rnaturalearth 1 askpass 158 shinymanager 3 NCmisc 1 SMVar 1 valr 1 HSAUR2 0 slam 13 metaMA 1 BatchJobs 1 betareg 1 sirnakit 0 spatstat.linnet 5 svUnit 0 plotmm 0 prettydoc 0 imager 1 GGally 19 rappdirs 3 gson 1 beeswarm 1 ggpp 5 rio 22 echarts4r 3 shinyAce 2 PoissonBinomial 0 ccdrAlgorithm 1 SID 1 ontologyIndex 1 panelr 0 lasso2 1 SpidermiR 0 selectr 1 gbRd 1 ids 0 cellranger 1 TreeSummarizedExperiment 0 robfilter 2 tokenizers 3 impute 1 ggpmisc 5 sna 2 beanplot 1 downloadthis 1 qgraph 1 europepmc 1 gridGraphics 1 phosphoricons 4 org.Pf.plasmo.db 0 mapplots 0 leaflet.providers 2 shinyTree 1 gapminder 0 rtables 6 Wrench 0 argusDS.Studio.utils 2 argusDS.data.preparation2 3 ClinViz 1 argusDS.data 3 nnls 16 moments 2 tidyTree 0 copula 2 shinyscreenshot 1 recountworkflow 0 rnaseqgeneedgerql 0 singscoreamlmutations 0 exphuntersuite 0 cageworkflow 0 Rmpfr 7 iheatmapr 1 poLCA 1 mgm 0 scuttle 2 berryFunctions 0 SuppDists 4 lamW 3 fBasics 5 jqr 1 scda.2022 0 shinydisconnect 3 CmsAnalytics 1 bsicons 2 biomartr 1 spgs 0 import 2 QuickJSR 6 reporter 1 qdapRegex 1 runjags 1 NMsim 0 tesseract 0 rAmCharts 1 tokupika 0 Luminescence 0 butcher 2 dcdatr 0 DistributionUtils 2 bestNormalize 2 animation 1 scatterD3 1 multipanelfigure 1 dbarts 4 ebal 0 kableExtra 12 twang 3 cvAUC 0 SQUAREM 1 argusDS.utilities 1 leafem 1 gginnards 1 ggprism 3 argusDS.FZ.SourceData 0 dbaccess 0 flux 0 tidyxl 2 sigclust 1 nor1mix 1 ggthemes 7 natserv 0 picante 0 vistime 1 rgdal 13 S4Arrays 2 fastICA 48 ridigbio 1 geodata 4 ggseqlogo 2 data.tree 5 rtweet 1 pathview 1 riverplot 1 AzureGraph 3 kSamples 2 AzureRMR 3 BWStest 2 greybox 0 prabclus 2 TimeProjection 1 mapview 1 apex 1 DoE.base 1 argusDS.model.testing 1 r2rtf 1 argusDS.data.engineering 1 pkgsearch 1 numbers 0 FrF2 1 extraDistr 2 float 2 presto 1 IncidencePrevalence 1 bigmemory.sri 3 fstcore 5 joineRML 1 MsFeatures 0 ProtGenerics 1 WriteXLS 6 ROC 0 HiClimR 0 tidytlg 1 zinbwave 0 statnet 0 gubraqsar 0 shinyFeedback 0 anRichment 0 ArvadosR 1 Morpho 0 FlowCore 0 gitlabr 1 CeTF 0 netmeta 0 EMD 1 syuzhet 0 leidenAlg 2 common 1 coveffectsplot 0 pmparams 1 nmrec 1 PK 0 RNAi 1 MultiAssayExperiment 0 jsonify 1 teal.widgets 1 lvec 0 BioGenerics 0 landscapemetrics 1 readODS 2 msigdb 1 descr 1 geodiv 0 scGate 1 wesanderson 1 useful 1 VGAMextra 0 bbotk 1 forestploter 1 BiocStyle 1 webutils 2 survcomp 0 libr 2 argusDS.DataValidation 1 TNO 0 DAISIE 1 rgnparser 1 dspNgs 0 circlesize 0 torch 1 engitomixmk2 0 sesame 1 sen2r 0 RSelenium 2 ROCR 1 basilisk 1 UpSetR 0 DDCompanion 1 jcolors 1 BMisc 0 lmomco 0 summarytools 1 RProtoBufLib 1 caper 0 ada 1 usmapdata 0 ropls 0 SeuratDisk 1 httput 0 rjsoncons 1 ICSNP 0 BIApylon 1 DNAcopy 1 rrapply 4 Herper 0 gifski 0 qvcalc 1 sos 1 tufte 0 fresh 11 starter 1 TFisher 0 GWENA 0 dfoptim 1 FME 0 madness 0 yspec 1 multicross 1 nbpMatching 0 BSgenomes 0 miloR 1 fftwtools 0 rmsb 0 prioritylasso 1 scs 0 relations 1 ncar 1 fastmatrix 1 SkewHyperbolic 2 sesameData 0 pegas 2 r 0 bigassertr 1 bayesplot 2 GenomicFeatures 2 RUVseq 0 SPARQL 1 biocViews 1 reshape 3 sparsesvd 2 Signac 7 ggbreak 1 Rchoice 0 triebeard 3 disk.frame 0 RcppParallel 21 rlemon 0 Rfast 7 pkgKitten 1 paws.cost.management 9 paws.security.identity 9 proffer 0 tinytest 0 ttdo 0 paws.storage 106 mitml 0 logger 27 dorothea 1 cosmosR 0 dada2 0 RcppNumerical 1 beachmat 2 mosaicCore 2 Rmisc 1 hsm 0 lemon 1 poorman 2 philentropy 2 qrnn 0 chromote 26 loo 7 fauxpas 0 bench 1 intervals 2 consort 1 rcartocolor 0 sas7bdat 0 vars 1 truncnorm 3 doFuture 2 mlbench 3 sccs 0 arsenal 1 countrycode 6 odbc 18 officedown 2 HDO.db 1 enrichplot 2 VGAM 6 HDF5Array 2 maxLik 1 biclust 0 BiocSingular 2 bigrquery 2 GSVAdata 0 tigris 11 spdep 12 ncdf4 9 modules 1 MAST 1 sfheaders 17 revealgenomics 0 chimeraviz 0 bambu 0 anndata 0 SingleCellExperiment 2 subselect 1 stringfish 6 harmony 8 geosphere 1 R.devices 1 rJava 104 fdrtool 5 PKPDmodels 1 rhino 19 lokern 1 rgexf 1 npsurv 1 Rcgmin 1 fastDummies 13 gsl 2 waiter 3 sparseMatrixStats 1 ggvenn 1 rbioapi 1 affy 1 mia 1 elasticsearchr 1 MuMIn 2 CAM 1 D2C 1 plogr 1 ChemmineR 1 munsell 167 argusDS.gamlss.modelling 3 gss 6 recommenderlab 0 optimx 1 ANCOMBC 1 SingleR 1 findpython 6 sva 1 clustree 2 gfonts 1 CMplot 0 vip 1 gongs 1 MSnbase 0 preprocessCore 1 MALDIquant 5 acepack 2 rematch 36 scMerge 0 chemometrics 0 janeaustenr 3 argusDS.Studio.permissions 3 mboost 3 argusDS.data.preparation 1 argus.DS.Credentials 2 rentrez 1 PossibilityCurves 1 spicyworkflow 0 expressionnormalizationworkflow 0 chipseqdb 0 geomxworkflows 0 liftover 0 methylationarrayanalysis 0 rnaseq123 0 jtools 1 mmrm 5 limSolve 1 arrayop 0 biobank 1 timeSeries 12 scda.2021 0 ompr 0 geojsonio 1 teal 2 MSstats 1 PullReadAnalysisData 0 vendormetadatahelpers 0 timetk 1 campsis 0 listviewer 1 mpn.scorecard 1 reactR 63 shinytoastr 1 nonnest2 1 adegraphics 0 adephylo 0 colorRamps 4 rhdf5filters 1 argusDS.apc.utils 3 LambertW 2 jnjtemplates 1 GUniFrac 1 RcmdrMisc 1 readstata13 1 pan 1 getopt 4 forestplot 2 AlgDesign 4 CBPS 1 SuperLearner 1 skmeans 1 argusDS.TradingSignals 1 uchardet 1 RCy3 0 tmap 1 ggalluvial 0 ggVennDiagram 3 bayesm 1 corpcor 2 TTR 5 here 1 intergraph 1 sequenza 1 plantecophys 0 slingshot 0 mcr 2 psychTools 1 rdflib 0 tidyterra 1 PMCMRplus 4 mlfa 0 DEXSeq 0 SimDesign 1 rMisbeta 1 ggh4x 5 clusterSim 1 multicool 5 archive 2 contentid 3 ompr.roi 0 gRain 1 argusDS.FCUtilities 1 worrms 2 gwasrapidd 1 DatabaseConnector 0 bigmemory 3 pmplots 1 skimr 1 highlight 0 Publish 1 GSVA 1 vhydeg 0 BayesFactor 1 fgsea 1 DECIPHER 1 complexheatmap 0 multiGSEA 1 ngsReports 0 scran 2 BSgenome.Omela.CUSTOM.oenMel1.1 0 wdman 2 AnnotationForge 1 TFBSTools 2 EpiStats 0 mFilter 0 transport 1 striprtf 0 groupdata2 1 rsnps 0 riskmetric 1 DoubletFinder 1 littler 1 ashr 1 JADE 0 BiocBaseUtils 1 corpora 0 osprey 1 pcalg 1 azcore 1 sysfonts 3 ChAMP 0 ExplorOMICS 0 keggsvg 0 seqmagick 1 maboost 1 RankAggreg 1 distr6 1 param6 1 set6 1 airr 1 exactextractr 0 fasterize 1 catboost 0 extraChIPs 0 structToolbox 0 CLIFF 0 FragPipeAnalystR 0 RVAideMemoire 0 getip 2 cgdsr 0 covRNA 0 scRNASeq.spatial 0 leaps 13 escape 1 candisc 1 smacof 1 futile.options 1 CytoTRACE 1 CNEr 1 densvis 1 imputeTS 0 stargazer 0 BSgenome.Mmusculus.UCSC.mm39 0 ROI.plugin.lpsolve 1 MafDb.gnomAD.r2.1.hs37d5 0 nat.utils 0 winboxr 1 RNeXML 0 rcompanion 1 DRDID 0 geojsonsf 0 randomizr 0 reclin 0 ReactomePA 1 limmia 0 utilsRmd 1 secrets 0 RIPSeeker 0 wikitaxa 0 dplyrb 0 muscat 1 EBImage 1 dastools 0 BIAutils 1 tgp 1 snowfall 1 DiceDesign 4 BioVersion 1 RMTstat 1 ChemmineOB 1 odyproteomicsValidator 0 NEONiso 0 blockmodeling 1 MatchThem 1 appgen 0 gWidgets 0 splitTools 1 mlr3proba 1 NanoPyx 0 MetaboAnalystR 0 fakepackage 0 spacrt 1 lastdose 1 rpsftm 0 wheatmap 0 RcppTOML 10 apexcharter 1 alphashape3d 0 TxDb.Hsapiens.UCSC.hg38.knownGene 1 BiocCheck 1 git2r 35 phyclust 0 tximportData 0 repr 8 batchtools 1 conflicted 2 simpar 1 GenSA 3 janitor 7 naniar 5 paws 9 ggsci 55 lfe 1 pmxTools 0 sets 1 phyloseq 1 ggplot 1 Matrix.utils 1 arules 2 lmom 5 osmdata 0 compositions 2 sunburstR 0 future.batchtools 1 flexmix 2 chk 5 btergm 0 microbenchmark 14 Lahman 1 rintrojs 3 pec 1 rstanarm 1 influenceR 1 admisc 7 ShinyItemAnalysis 0 flowAI 0 Hoover 1 Swiffer 1 DiagrammeR 2 spatstat.explore 41 diffloop 0 StanHeaders 9 ALL 1 Rsamtools 2 GenomicTools 0 treemap 1 glmGamPoi 1 DropletUtils 2 shinyMethyl 0 httptest 2 mirt 1 M3Drop 0 TCGAbiolinks 0 ALDEx2 1 pscl 2 alkahest.generic 0 rsvd 2 mutoss 1 gprofiler2 3 mlr3tuning 1 pryr 1 emdbook 1 org.Dr.eg.db 1 symphony 1 rAccess 1 RevGadgets 0 RcppThread 3 sendmailR 1 ClinicalQc 0 setRNG 1 RcppDate 1 tsne 1 entropy 1 lsei 1 infotheo 1 phytools 4 aws 1 backbone 0 gupio 1 gridExtra 1 praise 1 argusDS.backtesting.engine 2 argusDS.shiny.utils 1 argusDS.spread.trading.utils 2 KEGG.db 1 scviewer 0 kmed 0 ggExtra 3 cyclocomp 5 EnsDb.Hsapiens.v75 0 imputeLCMD 0 ggnetwork 1 spectacles 0 eulerr 1 pander 3 webshot2 2 this.path 1 argusDS.gamlss.utils 2 snakecase 10 rugarch 2 rnaseqdtu 0 simplesinglecell 0 tcgaworkflow 1 bp4rnaseq 0 csawusersguide 0 egsea123 0 fluentgenomics 0 crossmatch 1 compareGroups 0 ABAData 1 AnnotationFilter 1 polycor 0 sjlabelled 1 themis 0 ScDblFinder 0 bizdays 2 khroma 2 base64 4 argusDS.trading.performance 1 argusDS.model.tools 3 geojson 1 DataOmnio 0 mimosa 0 drat 1 sodium 4 webp 1 Biogenerics 0 rworldmap 1 emdist 0 RcppSimdJson 35 IAPWS95 0 directlabels 1 miniUI 1 SIAMCAT 0 RcppProgress 1 akima 1 ash 0 assertive.types 2 EValue 3 designmatch 1 rhandsontable 3 tmle 3 gmailr 2 gridSVG 1 pbdZMQ 2 geohashTools 0 FD 0 audio 1 RgoogleMaps 0 MetaboReport 0 quantable 0 pbmcref.SeuratData 1 celda 0 waffle 1 ArrayExpress 1 zlibbioc 4 qrcode 0 plotROC 1 diptest 3 smooth 0 lwgeom 4 PEMM 1 wrapr 1 deepregression 0 mlr3pipelines 1 graphql 1 fGarch 9 grImport 1 heplots 1 ewfutils 0 startup 1 fabletools 4 vipor 16 ICS 0 proxyC 2 COSG 0 whereami 0 shiny.react 6 DoseFinding 1 orientlib 0 MsCoreUtils 1 mzR 1 SNPlocs.Hsapiens.dbSNP151.GRCh38 0 tradeSeq 1 DESeq 0 IlluminaHumanMethylation450kanno.ilmn12.hg19 0 biovizBase 1 ShortRead 1 msdata 0 dynfeature 0 dynwrap 0 babelwhale 0 seqLogo 0 visR 1 LDlinkR 0 Rvcg 0 SeqArray 0 siscreener 0 workflowr 1 condiments 0 NormalizerDE 0 colortools 0 fmtr 2 gap.datasets 0 HardyWeinberg 0 glca 0 beadarray 0 goshawk 1 ATACseqQC 1 did 0 qualpalr 0 m03modeldevelopment 0 iatlas.app 0 signal 1 capsidr 0 REddyProc 0 neonUtilities 1 coxphf 1 tidyseurat 1 RNOmni 0 trackViewer 0 argusDS.modeldb 1 gaston 1 vcfR 1 BIGL 0 argusDS.FZ.utils 1 gittargets 1 cba 1 scLinear 0 NNLM 0 C50 0 tximport 1 mlflow 1 sommer 2 SomaVarDB 0 webchem 1 nat.util 0 BSgenome.Mmul10.SIVmac251 0 rMVP 2 moleculaR 0 remaCor 2 BSgenome.Drerio.UCSC.danRer11 0 english 0 argusDS.PossibilityCurves.db.utils 3 ggimage 1 networkDynamic 0 ijtiff 0 orca 1 DirichletMultinomial 1 tximeta 1 mixsqp 2 cdip.datastore 1 HTqPCR 0 fastshap 1 nonmem2rx 1 Dose 0 vdbR 0 dreamerr 0 Ckmeans.1d.dp 0 decor 0 PEIP 1 RPMG 1 LoomExperiment 0 tern 4 logistf 1 SCP 1 preAnomalyDetectionCredLife 1 BrowserViz 0 anticlust 0 teal.modules.clinical 1 scRNAseq 0 inlinedocs 0 gWidgetstcltk 0 nephro 0 Gmisc 0 ECOSolveR 1 ggstats 16 lbfgsb3c 1 palr 1 qwraps2 1 ThresholdROC 0 distances 1 fenr 0 coda.base 0 radiant.data 1 coxphw 0 getPass 2 daff 0 CoxPhLb 0 iBreakDown 0 APCtools 0 biostat3 0 Amelia 3 LowRankQP 0 rpf 0 tensorA 2 validate 1 astsa 0 confoundr 0 correlation 5 NbClust 1 gralarkivar 1 binman 2 piggyback 0 argusDS.data.visualisation 0 argusDS.distributions 0 r2d3 2 sampling 0 MCMCpack 3 base64url 0 SeuratWrappers 0 omnibus 1 pathfindR 1 redland 0 prettymapr 0 boomer 1 devutils 1 gameofthrones 1 PKreport 1 rrsq 1 secretbase 6 RUnit 3 rbokeh 1 deconstructSigs 0 ggwordcloud 1 afex 2 InraeThemes 0 ggtern 97 bcp 0 AdaptGauss 1 WikipediR 6 tern.gee 4 amap 1 blme 2 randomcoloR 1 base2grob 1 ips 3 MonoPhy 2 gtExtras 1 agricolae 3 sasLM 2 sassy 1 HGNChelper 6 CVXR 4 hoardr 3 BioNet 1 annaffy 1 topGO 1 Ringo 1 ReportingTools 1 roll 2 DAMEfinder 1 notame 1 multinma 1 nestcolor 2 fUnitRoots 2 Kendall 1 tclust 1 flowCore 1 dapr 1 rsparse 1 textrecipes 1 namer 1 packcircles 1 tidyquant 1 wkb 1 docopt 1 gclus 1 tiledbsoma 1 geomtextpath 1 hyperSpec 1 runner 3 see 3 incidence2 3 DiscriMiner 1 quanteda 2 mwcsr 1 assertive 1 assertive.strings 1 sdpR 1 fontquiver 1 SimMultiCorrData 1 statip 1 xlsxjars 1 mcmcabn 1 textshape 1 ichorCNA 1 MultiDataSet 1 NNgenesets 1 ActivePathways 1 plotmo 2 swagger 1 diffviewer 1 subplex 1 kmlShape 1 RVerbalExpressions 1 gamlss.data 3 phylobase 1 ggsurvfit 3 citril 1 RcppEnsmallen 1 mstate 1 startupmsg 1 memuse 1 simmer 1 osqo 1 sparsebnUtils 1 SqlRender 2 qubiGenestack 1 interactiveDisplayBase 1 eventdataR 1 crossdes 1 lime 1 qualV 1 solvebio 1 PolynomF 1 QGMI 1 rearrr 1 RANN 22 rrBLUP 1 shinyEventLogger 1 fma 1 QGtemplates 1 cliapp 1 nseval 1 wrMisc 1 pedtools 1 randtests 1 rfishbase 2 toastui 10 logspline 1 ontologyPlot 1 ds4psy 1 s3fs 1 safetyCharts 1 DoubleML 1 RcppAlgos 1 predictmeans 1 metacore 1 metatools 1 rmint.sdtm 1 xportr 1 lomb 1 xairadiffex 1 fame 1 BMA 1 sensemakr 2 mapDataAccess 1 EffectLiteR 2 GeneOverlap 1 rqdatatable 1 shiny.telemetry 1 rapiclient 1 FSelectorRcpp 1 r2r 1 cards 6 mlr3fselect 1 GoSemSim 1 preGgplot2 1 rgeoda 1 TestGenerator 1 GTAVTools 1 rpact 2 dixon 1 errorlocate 0 reghelper 0 treemapify 0 vitae 0 rmcorr 1 DALEX2 0 modelsummary 1 CoRegNet 1 elevatr 0 mctq 0 TOAST 1 PMA 1 cyphr 0 scITD 1 DataVisualizations 1 CAbiNet 1 ace.fma 1 IHW 1 bRacatus 1 rglwidget 1 sdmpredictors 1 blockCV 1 basilisk.utils 1 mix 1 org.Hs.eg.dB 1 teal.transform 1 bgs.hermes 1 ClusterTools 1 Metrics 1 NetPreProc 1 coneproj 1 RccpTOML 1 tmvnsim 1 NNutils 1 PeacoQC 1 PeakcoQC 1 pivotalPillars 1 MCMCglmm 1 BSgenome.Oaries.ENSEMBL.RambV2 1 N2R 1 BlythStillCasellaCI 1 xaringanExtra 1 gimme 1 iC10TrainingData 1 gwasvcf 1 bgs.hephaistos 1 agrmt 1 penalized 1 Matri 1 LDheatmap 1 QGplots 1 WibiR 1 ABHgenotypeR 1 metricsgraphics 1 Kernsmooth 1 mtvnorm 1 Hotgenes 1 dpi 1 taxadb 1 praznik 1 openSTARS 1 plsmod 1 hdnom 0 ncvreg 0 easyalluvial 0 mlr3spatiotempcv 0 GraphGallery 0 LinMod2 0 angrycell 0 zenith 1 preproc.iquizoo 1 maftools 1 ggchicklet 1 rrcovNA 1 HiTME 1 assertive.models 1 dendroextras 1 SpatialExperiment 1 CausalGPS 1 Cytotree 1 dv.teal 1 NetRep 1 MBA 1 RandomFields 1 RandomFieldsUtils 1 HiveR 1 mapboxapi 1 lavaanPlot 1 nichenetr 1 funModeling 1 RPtests 1 venneuler 1 mvnormtest 1 naivebayes 1 bshazard 1 genekitr 1 reactable.extras 1 tidytransit 1 JazzAIR 1 cardx 1 stacks 1 massHelper 1 StepReg 1 SNPlocs.Hsapiens.dbSNP142.GRCh37 1 survex 0 R2admb 0 argusDS.gamlss.smoothers 0 cellxgene.census 1 UniprotR 0 enrichPlot 0 StatCharrms 1 dpplyr 1 ChIPpeakAnno 1 dcat 1 idorsiaQC 1 protoarrayr 1 TNRS 1 nominatimlite 1 gglm 1 xmlparsedata 1 abc.data 1 msiImporter 1 semTools 1 constructive 1 glmmML 1 fmeffects 1 adbcdrivermanager 1 BayesFM 1 altdoc 1 mco 1 biglmm 1 mlt.docreg 1 skpr 1 smd 1 exams 1 HSAUR3 1 RDBS.plot 1 rmdfiltr 1 WebGestaltR 1 fExtremes 9 DALEX 1 stopwords 1 dagitty 0 SpatialEpi 0 OpenMx 1 jskm 0 ggpattern 1 Ryacas 0 relsurv 0 explore 0 fable 1 geojsonlint 0 adjustedCurves 0 splus2R 3 outliers 1 tsibbledata 1 lightgbm 2 ingredients 0 protr 1 renderthis 1 purrrr 0 GastrographPackage 0 chanmetab 0 rsm 1 exactci 0 AzureAuth 1 interactomes 1 SAGx 0 CytoML 1 radiant 0 methylclockData 0 methylclock 0 clustMixType 1 extrafontdb 1 leaflegend 2 satellite 3 openeo 0 audited 1 ghpm 1 hydroPSO 1 hrbrthemes 3 jagsUI 1 logrrr 1 satchel 1 symengine 1 IDPmisc 4 ggedit 1 spocc 1 monocle 1 MassSpecWavelet 0 coastr 0 Shinyusagelogr 1 ELMER.data 1 BioEnricher 0 IlluminaHumanMethylationEPICanno.ilm10b2.hg19 0 pspearman 1 argusDS.trading.optimization 1 rlistings 3 kinship2 3 swamp 1 brglm 1 modeltime.ensemble 2 prompter 3 gdsx 1 monkey 1 iNEXT 1 monocle3 1 NetBID2 1 pipebind 1 PAIRADISE 1 MOFA 1 demuxmix 1 marginaleffects 1 margins 1 geeasy 3 DataExplorer 1 assertive.files 1 assertive.base 2 argusDS.signal.dataprep 2 RcppInt64 1 SpatialDecon 1 alphavantager 1 hgu95av2.db 1 Category 1 Nebulosa 1 bumphunter 1 ggbio 1 affycoretools 1 Rcapture 1 procs 1 Glimma 1 Repitools 1 argusDS.database 2 lda 1 tfse 1 MatrixExtra 2 urltools 1 forge 1 egg 1 incidence 3 RNetCDF 3 ncmeta 3 topicmodels 2 iSEE 1 BB 1 mcv 1 RcppRoll 8 greekLetters 2 GWASExactHW 1 svDialogs 1 santoku 2 tidypredict 2 howmany 1 IDEAFilter 1 ModelR 1 FCBF 1 auth0 1 infercnv 1 strawr 1 grafify 2 rmatio 1 robustlmm 1 dataCompareR 1 zellkonverter 1 PubChemR 1 modelObj 1 NLP 3 ipw 1 caretEnsemble 44 omopgenerics 1 PatientProfiles 2 CBDD 1 highcharter 1 AzureStor 1 BDAtemplates 1 QGIOP 1 QGTAP 1 SpATS 2 adegenet 1 BGLR 2 vcdExtra 1 NADIA 1 agridat 1 async 1 gratia 1 L1pack 1 qiimer 1 multidplyr 1 spatstat.univar 6 Deriv 12 RNifti 1 timevis 1 usebox 1 phylolm 1 admiralophtha 1 unikn 1 EMAtools 1 negligible 1 chevron 1 cobasmsInstrumentCheckSSW 1 datacutr 1 waved 1 implyr 1 crew.cluster 1 apLCMS 1 teal.reporter 2 oricvis 1 drda 1 grateful 2 mlr3tuningspaces 1 mlr3viz 1 preColours 1 spatialFDA 1 CDMConnector 1 automap 3 refund 1 rGREAT 1 grpreg 1 genoset 1 sdtmchecks 1 RDCOMClient 0 bsts 0 aditools 0 sceptre 0 unmarked 0 msatR 0 rosm 0 patch 0 gdsfmt 1 glmperm 0 installr 0 argusDS.smoothers 0 faux 1 DiurnalMRI 0 ggdensity 0 rnaturalearthdata 1 consensusClustR 0 prada 0 datasauRus 1 d3treeR 0 survMS 0 censored 1 assertive.datetimes 1 ecfc 1 devEMF 1 gridBase 1 themeSanofi 1 tidyproteomics 1 rgr 1 poilog 1 HPC.R.Utilities 1 dir.expiry 1 twilight 1 pdInfoBuilder 1 IsoCorrectoR 1 gcrma 1 LOLA 1 scJonas 1 MSstatsConvert 1 GenOrd 1 proto 1 drugfindR 1 PCAmixdata 1 zelusutils 1 MicrobaCommunityProfileReader 1 PARdesign 1 genomeinfodbdata 1 alr3 1 GeneNMF 1 pivotalReporters 1 ComBatFamQC 1 RcisTarget 1 PROscorerTools 1 PropCIs 1 tidySEM 1 clv 1 graphsim 1 mi 1 BFpack 1 probably 1 FRASER 1 ASMap 1 statgenGxE 1 statgenSTA 1 statgenHTP 1 Boom 1 miniCRAN 1 dae 1 tidytable 1 MplusAutomation 1 sem 1 lisrelToR 1 cmocean 1 dpbuild 1 Rmixmod 1 rmcfs 1 myTAI 1 dplyr1 1 inferCNV 1 pivotalAbundances 1 readBrukerFlexData 1 PearsonDS 1 do 1 dataframes2xls 1 PowerExplorer 0 SeuratWrapper 0 RFOC 1 olsrr 0 lbaQcCheck 0 nestedcv 1 redison 0 qclMatrix 0 cliqueMS 0 ggrap2 0 mousecortexref.SeuratData 1 tibbke 1 NormalyzerDE 1 Rspectra 1 cellpypes 1 Unicode 1 SeruatObject 1 ccDSM 1 mregions 1 numbat 1 tinytable 1 ensurer 1 ReporteRs 1 Johnson 1 NBPSeq 1 rcorpora 1 extraoperators 1 swfscMisc 1 eaf 1 ivprobit 1 loe 1 CHNOSZ 1 fungible 1 modeltime 1 safeBinaryRegression 0 radiant.model 0 InformationValue 0 LogicReg 0 MKmisc 0 geobr 0 rayimage 0 FSA 1 rayvertex 0 distory 0 GAMBLR.results 1 polars 1 ITKR 1 bmspal 1 fineimp 1 Msnbase 1 scry 1 pathways 1 Cardinal 1 graphite 1 gsignal 1 MAtrixModels 1 crs 1 longmemo 1 sbw 1 rempsyc 1 piecewiseSEM 1 PROreg 1 psychotree 1 quickmatch 1 skellam 1 smcfcs 1 initiate.archr 1 estimate 1 TiPS 1 matrixStatst 1 CohortDiagnostics 1 monolix2rx 1 NGLVieweR 1 KRSA 1 usefun 1 MLmetrics 1 ggmosaic 0 JBrowseR 0 blavaan 1 SCtools 0 RISCA 0 gridpattern 2 mosaicData 1 metR 1 choroplethr 0 altair 0 ggside 6 kutils 0 tsibble 2 LiblineaR 1 ROSE 0 4.10.1 0 gamlss.add 2 SOMbrero 1 argusDS.gamboostLSS 0 PCAtools 1 exact2x2 0 laeken 2 rmspc 0 WorldFlora 0 densityClust 1 l2p 0 teal.data 3 TeachingDemos 2 rvertnet 1 immunarch 1 ore 0 ATE 1 broomExtra 1 BayesPostEst 1 ggalt 1 JMbayes 1 paquet 1 ncappc 1 nlmeODE 1 presser 1 R2jags 1 tabulizerjars 1 ELMER 1 ProgMan 0 maditr 1 poweRlaw 6 rslurm 0 shinystan 1 bindrcpp 1 fastGHQuad 1 fst 1 heatmap.plus 1 monaLisa 1 Rfast2 1 fit.models 1 job 3 dotwhisker 1 assertive.numbers 1 maxstat 1 PFAM.db 1 primeviewcdf 1 adSplit 1 hugene10sttranscriptcluster.db 1 cicero 1 aigoraFitMini 1 debugme 3 tidylog 1 dunn.test 1 tabulizer 1 urlchecker 1 text2vec 1 textfeatures 1 PLNmodels 1 ini 1 logging 1 connectapi 3 tiledb 1 frailtypack 3 easystats 3 grates 3 polyCub 3 MetStaT 1 AnnoProbe 1 liger 2 surveillance 3 rdrop2 1 BSgenome.Mmusculus.UCSC.mm10 1 biglm 5 aads.rnai 1 spacefillr 1 OlinkAnalyze 1 smoother 1 beepr 2 waveslim 1 toOrdinal 1 bkbutils 1 ClusterProfiler 1 tester 1 optimr 1 websocket 24 iCiteR 3 report 5 PwrGSD 1 adehabitat 1 udunits2 1 piton 1 lmerTest 1 readJDX 1 unix 1 argparser 1 aricode 1 teal.goshawk 1 oompaBase 1 WA43966.shareR.3043877 1 fpp2 1 QGEDP 1 d3heatmap 1 regress 1 bigsparser 1 rmio 1 IRdisplay 1 hpgltools 1 gstat 2 qualtRics 1 som 1 bib2df 1 scRepertoire 1 energy 2 box.linters 1 screpertoire 1 cdcfluview 1 DAAG 1 ANCOMBCs 1 tidycmprsk 1 diffdf 2 visOmopResults 1 concordancer 1 massTRACE2Tools 1 cobasmsThemes 1 rbacon 1 argusDS.signal.backtesting 1 rintcal 1 rEDM 1 teal.builder 1 tourr 1 contingencytables 1 derfinderData 1 fpp3 1 mlr3cluster 1 godm 1 shinylive 1 crmPack 2 unigd 1 refinr 1 pulsar 0 tidyHeatmap 1 mixture 0 ufs 0 parcats 0 rsatscan 0 XIFF 0 tidydr 0 gausscov 0 miceadds 0 Rsubread 1 ptw 0 pbv 0 APL 0 VIM 1 NORMT3 0 R2GUESS 0 utilsStuff 1 metapod 1 assertive.data 1 assertive.data.uk 1 assertive.reflection 1 deconfectHelpers 1 spdata 1 tensor 1 cydar 1 microbiome 1 wallace 1 rangeModelMetadata 1 SSDM 1 ROCit 1 NanoStringDiff 1 OrderedList 1 cqn 1 oligoClasses 1 bluster 1 epuRate 1 BPCells 1 ddpcr 1 Turnover.cells.pSILAC.TMT 1 triangle 1 jonasrscripts 1 gwascat 1 openCyto 1 SeuratData 1 hdf5r.Extra 1 rmeta 1 PBSmapping 1 coRanking 1 extRemes 1 ftExtra 1 precrec 1 HDmap 1 ICC 1 BoomSpikeSlab 1 FineR 1 namespace 1 ProjecTILs 1 granny 1 dpdeploy 1 daapr 1 HTSCluster 1 treesitter.r 1 DataFerry 1 rwdisplay 1 pkglite 1 dplyr12 1 dunlin 1 autometric 1 singleR 1 CodelistGenerator 1 CohortCharacteristics 1 stdmchecks 0 MBESS 0 spatsurv 0 VariantWarehouseBMS 0 RNAmodR.Data 0 GeoTcgaData 0 Biostring 0 neo2R 1 doseR 0 ComplexUpset 1 hdf5 1 TxDb.Hsapiens.UCSC.hg19.knownGene 1 plotfunctions 1 ACTIONet 1 Azimuth 1 frictionless 1 cytofkit 1 ProSpect 1 SC3 1 assertive.sets 1 phenoTest 1 trendeval 1 qualityTools 1 BiodiversityR 1 pivotalPilars 1 AsgntDAMacro 1 CARTools 1 FField 1 qreport 1 EuPathDB 1 otargen 1 bgs.ggtheme 1 gotop 1 mvPot 1 nullabor 1 ivreg 1 casebase 1 ctsem 1 dynamite 1 gp.version 1 saeRobust 1 taylor 1 castoRedc 1 minga 1 redoc 1 SSPA 1 godmode 0 SPOTlight 0 rayrender 0 gmthemes 1 iatlasGraphQLClient 0 envalysis 1 tuneRanger 1 PupillometryR 1 ENMTools 1 ecospat 1 tippy 1 satuRn 1 deEndometrial 1 dslabs 1 DARAtools 1 censReg 1 clubSandwich 1 Bessel 1 adehabitatLT 1 equatags 1 logitr 1 mhurdle 1 shapviz 1 arulesViz 1 Rpoppler 1 estimatr 1 kit 1 interactions 1 admiralroche 1 oceanflow 1 flare 1 AIMS 1 snpar 0 WRS2 2 Synth 0 rgenoud 1 date 0 bain 1 RBGL 1 qicharts 0 redux 0 protViz 0 S4vectors 0 teal.code 2 VariantAnnotation 1 usdm 1 Rcmdr 1 argusDS.S3 2 DMwR 0 fftw 1 SmartEDA 0 ava2 1 ruODK 0 SplicingVizUtils 1 tsoutliers 2 basemaps 1 modelbased 4 nls2 1 dnet 1 freetypeharfbuzz 1 metrumrg 1 markovchain 1 PKPDdatasets 1 pkgpub 1 optweight 1 PowerTOST 1 ROI.plugin.glpk 1 rstanemax 1 SASxport 1 XLConnectJars 1 karyoploteR 0 shinipsum 1 shiny.semantic 1 aod 1 fido 1 ascii 1 feather 1 ISOcodes 2 profileModel 1 enrichwith 1 MendelianRandomization 3 httptest2 1 taxonomizr 1 fairhub.r.client 1 microeco 1 prediction 2 teal.slice 3 nanopipeline 1 ggm 1 actuar 1 primeviewprobe 1 geneplotter 1 hgu133a.db 1 hgu133plus2.db 1 ExperimentHub 1 chromVAR 1 googlesheets 1 rlist 1 traits 1 argusDS.UI 2 GOstats 1 OrganismDbi 1 IsoCorrectoRGUI 1 pspline 2 shiny.blueprint 2 strandannotate 1 synapser 1 BIEN 1 shiny.fluent 3 pdfCluster 1 cmapR 1 leaflet.extras 3 feasts 4 finetune 1 fairhub.metadata 1 ChIPQC 1 silver3 1 stxBrain.SeuratData 1 nanoarrow 1 tern.mmrm 2 EpiNow2 3 SparseArray 2 dsr 3 EnsDb.Hsapiens.v86 1 R2HTML 1 jsonvalidate 1 lfda 1 rARPACK 1 fontLiberation 1 qtl 3 SomaDataIO 3 stabledist 5 fontBitstreamVera 1 modeest 1 stable 1 PRISMselector 1 txdbmaker 1 tidyfst 1 venn 1 dsb 1 InteractiveComplexHeatmap 1 LMI 1 tfrmt 1 corncob 1 spacexr 1 emstreeR 1 binb 1 threejs 1 testit 1 manipulateWidget 1 rcdklibs 1 tidyclust 2 DynTxRegime 1 PROscorer 1 mongolite 2 topr 11 discretecdAlgorithm 1 b64 1 DMRcatedata 1 shinyloadtest 1 bupaR 1 heritability 1 priceR 2 plot3Drgl 1 BioInstaller 1 ggupset 2 bigstatsr 1 emoa 1 addinslist 1 coloRz 1 captioner 1 dlm 1 LMMsolver 1 pbmcapply 1 funkyheatmap 1 alsace 1 fhcmacro 1 sftime 2 dowser 1 modEvA 1 fmsb 1 broom.mixed 2 BioManager 1 psychonetrics 1 logrx 1 argusDS.studio.ml 1 cobasmsInstrumentCheck 1 argusDS.studio.model.utils 1 scoringRules 1 hetGP 1 pdp 1 teal.logger 3 eatGADS 2 eatTools 2 tsbox 1 statgenGWAS 1 cffr 1 slopeR 1 mlr3filters 1 anytime 10 gdm 3 reporting 1 flower 1 easyENTIM 1 rmapshaper 0 mma 0 GSEAbase 0 rasterVis 1 ggspatial 0 misty 0 TauStar 0 oncomarkerbase 0 ggmsa 0 BiplotML 1 iptmnetr 0 roxygen 0 CytoTree 0 poppr 0 rspm 0 Dino 1 patientProfilesVis 1 pkbrtest 1 assertive.data.us 1 protti 1 teal.modules.sanofi 1 teal.builder.modules 1 bettermc 1 bsseq 1 BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major 1 riem 1 rnoaa 1 oce 1 drc 1 NanoStringNorm 1 teal.osprey 1 biomod2 1 enmSdmX 1 fuzzySim 1 tldrm 1 affxparser 1 KEGGgraph 1 CATALYST 1 mgvc 1 rpromis 1 beaver 1 dataRetrieval 1 HDLSSkST 1 tryCatchLog 1 ClustOfVar 1 smotefamily 1 transformGamPoi 1 UCSC.utils 1 destiny 1 matrix 1 goodpractice 1 ReporteRsjars 1 mdmb 1 Ecume 1 maser 1 easy.utils 1 HMMcopy 1 iC10 1 AUC 1 impmap 1 multiplex 1 AER 1 longComplexHeatmap 1 QGqtl 1 statgenIBD 1 statgenMPP 1 synbreed 1 metan 1 asremlPlus 1 scooter 1 mosaic 1 sparr 1 argusDS.signal.generation 1 roak 1 CompToxTools 1 RTriangle 1 HDF5 1 schex 1 mlr3mbo 1 antaresProcessing 1 rapidjsonr 1 missForest 1 openxlsx2 1 leadfindingreport 1 admiralonco 1 mlr3verse 1 katex 1 ptm.stoichiometry 1 SimInf 0 BridgeDbR 0 preprocessorCore 0 dblplyr 0 rcpp 0 GEOmap 1 magicaxis 0 DNABarcodes 0 deeptime 0 rsparkling 0 plyranges 0 cols4all 1 arvupload 1 snapcount 1 glmGamPoiR 1 decoupler 1 BiocFileCaches 1 org.Psativumv2.eg.db 1 NanoStringQCPro 1 poeticST 1 assertive.matrices 1 marray 1 graper 1 bccaEndometrial 1 circular 1 worcs 1 survAUC 1 distributions3 1 nimble 1 domir 1 gtreg 1 ggplot.multistats 1 splice2neo 1 OhdsiShinyModules 1 MSstatsPTM 1 polylabelr 1 clusterpval 1 sosta 1 flowchart 1 coxme 1 bestglm 0 tornado 0 NACHO 0 simr 0 ResourceSelection 0 GAMBoost 0 argusDS.model.validation 0 fastqcr 0 org.At.tair.db 0 LBE 1 sctrnasform 1 poibin 1 CoordinateCleaner 1 simresults 1 RNAseqQC 1 aroma.light 1 RBioFormats 1 ggtreeExtra 1 catdata 1 cobs 1 tabulapdf 1 crch 1 glmx 1 SGPdata 1 popEpi 1 psychotools 1 mmpf 1 fastverse 1 tinylabels 1 AlphaSimR 1 lmodel2 1 qctools 1 conflrhlx 1 dipsaus 1 ProfilerAPI2 1 ympes 1 standby 1 leafgl 1 bonemarrowref.SeuratData 1 DR.SC 1 Boruta 1 flowUtils 1 PCDSpline 1 EpiDISH 1 iotools 1 minty 1 SFSI 1 MATRIX 1 CePa 1 paran 1 aggregateBioVar 1 DAISIEprep 1 PhViD 1 EmbedSOM 1 rsq 1 teal.builder.checks 1 ggvis 1 shiny.worker 1 QGDA 1 RPresto 1 RxODE 1 uwo 1 rtables.officer 1 MixSim 0 revgeo 1 minimal 1 EntropyEstimation 1 teRcenHttp 0 TreeTools 1 pneumotypr 1 pedigree 1 argusDS.studio.visualisations 1 vtable 1 koalaNetworkDriveData 1 spec 1 ChronosDSTools 1 ondisc 1 fastmat 1 s3 1 qs2 1 EnvDataQC 1 R6P 1 duckplyr 1 downloader 1 metadat 1 MATRIXS 1 tinkr 1 depmapSLr 1 tree 1 GOsummaries 1 emoji 1 MAI 1 mrds 1 legocolors 1 scagnostics 1 DWSClient 1 readat 1 Rlabkey 1 GreyListChIP 1 CodeDepends 1 AAVess 1 rtfmt 1 cpp11bigwig 1 Andromeda 1 bibliometrix 1 quanteda.textstats 1 switchstep 1 magittr 1 plotthis 1 entropart 1 MeanShiftR 1 bindr 1 netgwas 1 colorSpec 1 tidygate 1 reformulas 1 Nonpareil 1 clarabel 1 ggkegg 1 cicerone 1 mmrbws 1 microViz 1 obliqueRF 1 selenider 1 bonsai 1 RRF 1 sparsevctrs 1 orcutt 1 stabilityTools 1 clisymbols 1 TwoSampleMR 1 hta.ard 1 Seraut 1 org.Ssalar.eg.db 1 verification 1 gsEasy 1 JointAI 0 Numero 0 PSAgraphics 0 revealxpress 1 citril.metadata 1 treesitter 1 clixyzabc 1 HaploSim 1 PopVar 1 random.cdisc.data 1 NNsig 1 botor 1 ctv 1 pastecs 1 sdw 1 SurvMetrics 1 meta 1 metaplot 1 eatRep 1 BioMarks.ProteomeR 1 nc 1 arkdb 1 pmqtsreport 1 TropFishR 1 Rapp 1 SeqVarTools 1 attempt 1 Distance 1 clustra 0 autoslideR 1 phargorn 1 cpp11armadillo 1 RcppZiggurat 1 RaMS 1 SpatialPack 1 openalexR 1 PSweight 1 Nozzle.R1 1