TENxBrainData
This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see TENxBrainData.
Data from the 10X 1.3 Million Brain Cell Study
Bioconductor version: 3.8
Single-cell RNA-seq data for 1.3 million brain cells from E18 mice, generated by 10X Genomics.
Author: Aaron Lun [aut], Martin Morgan [aut], Bioconductor Package Maintainer [cre]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
citation("TENxBrainData")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TENxBrainData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("TENxBrainData")| Exploring the 1.3 million brain cell scRNA-seq data from 10X Genomics | HTML | R Script |
| Reference Manual |
Details
| biocViews | ExperimentData, ExpressionData, RNASeqData, SequencingData, SingleCellData |
| Version | 1.2.0 |
| License | CC BY 4.0 |
| Depends | SingleCellExperiment, HDF5Array |
| Imports | AnnotationHub(>= 2.9.22), ExperimentHub |
| System Requirements | |
| URL |
See More
| Suggests | knitr, BiocStyle, snow, BiocFileCache, BiocParallel, data.table |
| Linking To | |
| Enhances | |
| Depends On Me | simpleSingleCell |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | TENxBrainData_1.2.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/TENxBrainData |
| Source Repository (Developer Access) | git clone [email protected]:packages/TENxBrainData |
| Package Short Url | https://bioconductor.org/packages/TENxBrainData/ |
| Package Downloads Report | Download Stats |