MafDb.1Kgenomes.phase1.hs37d5
This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see MafDb.1Kgenomes.phase1.hs37d5.
Minor allele frequency data from 1000 Genomes Phase 1 for hs37d5
Bioconductor version: 3.8
Store minor allele frequency data from the Phase 1 of the 1000 Genomes Project for the human genome version hs37d5.
Author: Robert Castelo [aut, cre]
Maintainer: Robert Castelo <robert.castelo at upf.edu>
Citation (from within R, enter
citation("MafDb.1Kgenomes.phase1.hs37d5")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MafDb.1Kgenomes.phase1.hs37d5")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | AnnotationData, Genetics, GenomicScores, Homo_sapiens |
| Version | 3.7.1 |
| License | Artistic-2.0 |
| Depends | R (>= 3.0.0), GenomicScores(>= 1.3.19) |
| Imports | utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome |
| System Requirements | |
| URL |
See More
| Suggests | SNPlocs.Hsapiens.dbSNP144.GRCh37 |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | GenomicScores, VariantFiltering |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | MafDb.1Kgenomes.phase1.hs37d5_3.7.1.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Package Short Url | https://bioconductor.org/packages/MafDb.1Kgenomes.phase1.hs37d5/ |
| Package Downloads Report | Download Stats |