BSgenome.Vvinifera.URGI.IGGP8X
This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Vvinifera.URGI.IGGP8X.
Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (IGGP version 8X)
Bioconductor version: 3.8
Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (derived from Pinot Noir and close to homozygosity after 6-9 rounds of selfing) as assembled by the IGGP (version 8X) and available at the URGI (INRA). More details in Jaillon et al (Nature, 2007).
Author: Timothee Flutre [cre,aut]
Maintainer: Timothee Flutre <timothee.flutre at supagro.inra.fr>
citation("BSgenome.Vvinifera.URGI.IGGP8X")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BSgenome.Vvinifera.URGI.IGGP8X")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | AnnotationData, BSgenome, Genetics, Vitis_vinifera |
| Version | 0.1 |
| License | CC0 |
| Depends | BSgenome(>= 1.38.0) |
| Imports | BSgenome |
| System Requirements | |
| URL |
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Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BSgenome.Vvinifera.URGI.IGGP8X_0.1.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Package Short Url | https://bioconductor.org/packages/BSgenome.Vvinifera.URGI.IGGP8X/ |
| Package Downloads Report | Download Stats |