Changes in version 2.6.2:

    o   Fix issue in the formatData() function. It is now possible to format
	 using fpkm expression values when using Bgee 14.0.

    o   Implementation of regression tests

    o   Update vignette and README

Changes in version 2.6.1:

    o   Fix issue on Bgee 14.0 tar.gz annotation file management.

    o   Update README and DESCRIPTION files.

Changes in version 2.6.0:

    o   Compatibility with new tar.gz compressed download files.

    o   Better management of potential issues with the ontology structure.

    o   Better management of .RData object datasets used to create the
	 vignette.

    o   Fixed small issue with species names composed of more than 2 names
	 (e.g Canis lupus familiaris).

Changes in version 2.3.2:

    o   Compatibility of the TopAnat part of the package with the new Bgee
	 release 14 (www.bgee.org/bgee14/).

    o   Better management of potential issues with the ontology structure.

Changes in version 2.3.1:

    o   Compatibility with the new Bgee release 14 (www.bgee.org/bgee14/)
	 only for the processed data download part.

    o   The TopAnat part still temporarily uses data from Bgee release 13.2,
	 until the webservice is ready.

    o   Retro compatibility with Bgee release 13.2 (www.bgee.org/bgee13/).

Changes in version 2.2.0:

    o   Instead of returning a topGO-compatible object, topAnat.R now
	 returns an object from the topAnatData class, an extension of
	 topGOdata class from the topGO package.

    o   Fixed small issue with management of data types given as input by
	 the user (dataType argument when creating new Bgee class)

    o   Fixed bug in experiment Id check step. Now accomodates SRA Ids.

    o   Fixed data frames header names that included double dots.

    o   Removed dependency to biomaRt in vignette. Code is still detailed
	 but not run, instead a pre-created gene list object is loaded from
	 the data/ directory.

Changes in version 2.0.0 (2016-10-10):

    o   Implemented possibility to deal with different Bgee releases.

    o   Improved storage and versioning of cached files.

    o   Implemented use of API key to query our servers in order to prevent
	 overloading and spamming.

    o   Improved management of downloading errors.

    o   Harmonized the use of a Bgee class object by all functions of the
	 package. For example, loadTopAnatData() now requires an input Bgee
	 class object to specify species, dataType and pathToData arguments.

    o   Added input Bgee class object to output of loadtopAnatData()
	 function.

    o   Created new getAnnotation(), getData() and formatData() independent
	 functions to replace the Bgee class methods get_annotation(),
	 get_data() and format_data().

    o   In formatData() function, when affymetrix data is used, the "stats"
	 parameter is automatically set to "intensities".

    o   Added possibility to reproduce an analysis offline if all data files
	 were previously downloaded in cache.

    o   Fixed data frames headers including spaces to more convenient
	 headers with spaces replaced by dots.

    o   Harmonized use of camelCase in functions arguments.

    o   Added argument allowing to sort result table in makeTable()
	 function.

    o   Implemented management of TPMs as expression unit in future Bgee
	 releases.

    o   Updated vignette.

Changes in version 1.0.3 (2016-08-31):

    o   Update of format_data() function to output an Expression Set object.

    o   Fixed makeTable "FDR" column which was a factor instead of a
	 numeric.

    o   Fixed get_data() and format_data() functions, which did not work
	 when multiple chip types were available for an experiment.

Changes in version 1.0.0 (2016-05-03):

    o   Public release of BgeeDB Bioconductor package. Enjoy!