flowVS
This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see flowVS.
Variance stabilization in flow cytometry (and microarrays)
Bioconductor version: 3.8
Per-channel variance stabilization from a collection of flow cytometry samples by Bertlett test for homogeneity of variances. The approach is applicable to microarrays data as well.
Author: Ariful Azad
Maintainer: Ariful Azad <azadcse at gmail.com>
Citation (from within R, enter
citation("flowVS")
):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flowVS")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowVS")
flowVS: Cell population matching and meta-clustering in Flow Cytometry | R Script | |
Reference Manual |
Details
biocViews | CellBasedAssays, FlowCytometry, ImmunoOncology, Microarray, Software |
Version | 1.14.1 |
In Bioconductor since | BioC 3.1 (R-3.2) (9 years) |
License | Artistic-2.0 |
Depends | R (>= 3.2), methods, flowCore, flowViz, flowStats |
Imports | |
System Requirements | |
URL |
See More
Suggests | knitr, vsn |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | flowVS_1.14.1.tar.gz |
Windows Binary | flowVS_1.14.1.zip |
Mac OS X 10.11 (El Capitan) | flowVS_1.14.1.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/flowVS |
Source Repository (Developer Access) | git clone [email protected]:packages/flowVS |
Bioc Package Browser | https://code.bioconductor.org/browse/flowVS/ |
Package Short Url | https://bioconductor.org/packages/flowVS/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.8 | Source Archive |