CHANGES IN VERSION 1.0.7
-------------------------
	o Fix error when there is a space in the variable name in fitVarPartModel
	o Fix doi in citation

CHANGES IN VERSION 1.0.6
-------------------------
	o fix typo in vignette
	o add citation after upload to bioRxiv

CHANGES IN VERSION 1.0.5
-------------------------
	o fix typos in titles and documentation

CHANGES IN VERSION 1.0.4
-------------------------
	o fix vignette lmer() call and citations

CHANGES IN VERSION 1.0.2
-------------------------
	o fix bug checkModelStatus() for variables with backticks in name

CHANGES IN VERSION 1.0.1
-------------------------
	o Bug fixes for manuscript submission
	o Vignette fixes for manuscript submission

CHANGES IN VERSION 1.0.0
-------------------------
	o Release to Bioconductor 3.2

CHANGES IN VERSION 0.99.9
-------------------------
	o add legend argument to plotStratifyBy()
	o improve warnings / errors for varying coefficient models
	o allow user to manually adjust cutoff for determining when design matrix is singular
	  - changed default cutoff to 0.999 from 0.99

CHANGES IN VERSION 0.99.8
-------------------------
	o improve warnings / errors when design matrix is close to or exactly singular

CHANGES IN VERSION 0.99.7
-------------------------
	o added new class varPartResults to store results of fitExtractVarPartModel() and extractVarPart()
	  - the user will not notice any change, only the backend is different
        o Allow computation of adjusted ICC in addition to ICC.
	o add warning when categorical variables are modeled as fixed effects
	o fix computation of variance fractions for varying coefficient models
	o add getVarianceComponents() to return variances from lmer() or lm() model fit
	o showWarnings=FALSE suppresses warning messages
	o add fxn argument to fitVarPartModel to evaluate any function on the model fit

CHANGES IN VERSION 0.99.6
-------------------------
	o Update DESCRIPTION information

CHANGES IN VERSION 0.99.5
-------------------------
	o residuals deals with missing data gracefully and returns a matrix

CHANGES IN VERSION 0.99.4
-------------------------
       o add documentation for example datasets
       o convert calcVarPart() to S4 from S3 function call
       o fix typos in vignette

CHANGES IN VERSION 0.99.3
-------------------------
       o fitVarPartModel() and fitExractVarPartModel() use S4 instead of S3 calls 

CHANGES IN VERSION 0.99.2
-------------------------
	o rename sort.varParFrac to sortCols
	o support ExpressionSet
	o change options for plotStratifyBy()

# Before Bioconductor submission

CHANGES IN VERSION 0.0.12
-------------------------
	o add plotStratifyBy()
	o update documentation

CHANGES IN VERSION 0.0.11
-------------------------
	o fix sort to work on correct argument

CHANGES IN VERSION 0.0.10
-------------------------
	o fitExtractVarPartModel() and fitVarPartModel() now take subset argument
	o throw warning when no Intercept is specified
	o if using lmer, warning if categorical variable is modeled as fixed effect
	o fixed calcVarPart bug with reporting too few variances for multicategory fixed effects
	o add colinearityScore

CHANGES IN VERSION 0.0.9
-------------------------
    o function now use the precision weights when specified
	o remove warning about unspecified weights, when useWeights=TRUE
	o fix issue with sort with only one variable
	o add main argument to plotVarPart

CHANGES IN VERSION 0.0.8
-------------------------
        o Bug update to vignette and simulated data

CHANGES IN VERSION 0.0.7
-------------------------
	o remove 'variable' from xlab of plotVarPart

CHANGES IN VERSION 0.0.6
-------------------------
	o set REML=FALSE to default.  This fixes issues of inaccurate variance estiamtes, and makes lmer() results more concordant with lm() results
	o Fix residuals function when lm or lmer is used
	o fix useWeights argument error for fitExtractVarPartModel()


CHANGES IN VERSION 0.0.5
-------------------------
        o plotVarPart() as ylim=c(0,100) as default, and can be changed by user
	o fitExtractVarPartModel() labels rows correctly


CHANGES IN VERSION 0.0.4
-------------------------
	o Add sort() for output of extractVarPart() or fitExtractVarPartModel()


CHANGES IN VERSION 0.0.3
-------------------------

	o add residuals function
	o add fitExtractVarPartModel()
	o foreach loops us iterators


CHANGES IN VERSION 0.99.0
-------------------------
	
	o Initial version