minfiDataEPIC

This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see minfiDataEPIC.

Example data for the Illumina Methylation EPIC array


Bioconductor version: 3.19

Data from 3 technical replicates of the cell line GM12878 from the EPIC methylation array.

Author: Jean-Philippe Fortin, Kasper Daniel Hansen

Maintainer: Kasper Daniel Hansen <kasperdanielhansen at gmail.com>

Citation (from within R, enter citation("minfiDataEPIC")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("minfiDataEPIC")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData
Version 1.30.0
License Artistic-2.0
Depends R (>= 3.5.0), minfi(>= 1.21.2), IlluminaHumanMethylationEPICmanifest, IlluminaHumanMethylationEPICanno.ilm10b2.hg19
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me MethylAid, REMP, minfi, recountmethylation, MethylAidData
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package minfiDataEPIC_1.30.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/minfiDataEPIC
Source Repository (Developer Access) git clone [email protected]:packages/minfiDataEPIC
Package Short Url https://bioconductor.org/packages/minfiDataEPIC/
Package Downloads Report Download Stats